.gitignore

@@ -11,5 +11,3 @@ libs
 out
 .DS_Store
 lib/kotlin-*
-build
-.history

README.md

@@ -1,6 +1,6 @@
 # Kobalt
 
-[<img src="https://teamcity.jetbrains.com/app/rest/builds/buildType:(id:OpenSourceProjects_Kobalt_Build)/statusIcon.svg">](https://teamcity.jetbrains.com/project.html?projectId=OpenSourceProjects_Kobalt&tab=projectOverview)
+[<img src="https://teamcity.jetbrains.com/app/rest/builds/buildType:(id:OpenSourceProjects_Kobalt_Build)/statusIcon">](https://teamcity.jetbrains.com/project.html?projectId=OpenSourceProjects_Kobalt&tab=projectOverview)
 
 
 Kobalt is a universal build system.
@@ -8,7 +8,7 @@ Kobalt is a universal build system.
 To build it:
 
 ```
-$ ./kobaltw assemble
+./kobaltw assemble
 ```
 
 Please see [the web site](http://beust.com/kobalt/) for the full documentation.

build.gradle

@@ -1,58 +0,0 @@
-allprojects {
-    group = 'com.beust'
-    version = '1.1.0'
-}
-
-subprojects {
-    apply plugin: 'java'
-    apply plugin: 'maven-publish'
-
-    ext {
-        bndlib = '3.5.0'
-        findbugs = '3.0.2'
-        groovy = '2.4.12'
-        gson = '2.8.2'
-        guice = '4.2.2'
-        inject = '1'
-        jaxb = '2.3.0'
-        jcommander = '1.72'
-        kotlin = '1.2.71'
-        maven = '3.5.2'
-        mavenResolver = '1.1.0'
-        okhttp = '3.9.1'
-        okio = '1.13.0'
-        retrofit = '2.3.0'
-        slf4j = '1.7.3'
-        spark = '2.6.0'
-        testng = '6.12'
-
-        junit = '4.12'
-        junitJupiter = '5.1.0'
-        junitPlatform = '1.1.0'
-    }
-
-    repositories {
-        mavenCentral()
-        mavenLocal()
-        jcenter()
-        maven {
-            url = 'https://dl.bintray.com/cbeust/maven'
-        }
-
-        maven {
-            url = 'https://repo.maven.apache.org/maven2'
-        }
-    }
-
-    sourceCompatibility = '1.7'
-
-    task sourcesJar(type: Jar) {
-        from sourceSets.main.allJava
-        archiveClassifier = 'sources'
-    }
-
-    task javadocJar(type: Jar) {
-        from javadoc
-        archiveClassifier = 'javadoc'
-    }
-}

dist/kobaltw

@@ -1,11 +1,7 @@
 #!/usr/bin/env sh
 
-case "$(uname)" in
-    CYGWIN*) DIRNAME=$(cygpath -d "$(dirname "$(readlink -f "$0")")");;
-    Darwin*) DIRNAME=$(dirname "$(readlink "$0")");;
-    *) DIRNAME=$(dirname "$(readlink -f "$0")");;
-esac
-if [ "$DIRNAME" = "." ]; then
-    DIRNAME="$(dirname "$0")"
+DIRNAME=`dirname $(readlink -f "$0")`
+if [[ "$(uname)" == "CYGWIN"* ]]; then
+    DIRNAME=`cygpath -d "$DIRNAME"`
 fi
 java -jar "${DIRNAME}/../kobalt/wrapper/kobalt-wrapper.jar" $*

gradle/wrapper/gradle-wrapper.properties

@@ -1,5 +0,0 @@
-distributionBase=GRADLE_USER_HOME
-distributionPath=wrapper/dists
-distributionUrl=https\://services.gradle.org/distributions/gradle-5.3-bin.zip
-zipStoreBase=GRADLE_USER_HOME
-zipStorePath=wrapper/dists

gradlew

@@ -1,188 +0,0 @@
-#!/usr/bin/env sh
-
-#
-# Copyright 2015 the original author or authors.
-#
-# Licensed under the Apache License, Version 2.0 (the "License");
-# you may not use this file except in compliance with the License.
-# You may obtain a copy of the License at
-#
-#      http://www.apache.org/licenses/LICENSE-2.0
-#
-# Unless required by applicable law or agreed to in writing, software
-# distributed under the License is distributed on an "AS IS" BASIS,
-# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
-# See the License for the specific language governing permissions and
-# limitations under the License.
-#
-
-##############################################################################
-##
-##  Gradle start up script for UN*X
-##
-##############################################################################
-
-# Attempt to set APP_HOME
-# Resolve links: $0 may be a link
-PRG="$0"
-# Need this for relative symlinks.
-while [ -h "$PRG" ] ; do
-    ls=`ls -ld "$PRG"`
-    link=`expr "$ls" : '.*-> \(.*\)$'`
-    if expr "$link" : '/.*' > /dev/null; then
-        PRG="$link"
-    else
-        PRG=`dirname "$PRG"`"/$link"
-    fi
-done
-SAVED="`pwd`"
-cd "`dirname \"$PRG\"`/" >/dev/null
-APP_HOME="`pwd -P`"
-cd "$SAVED" >/dev/null
-
-APP_NAME="Gradle"
-APP_BASE_NAME=`basename "$0"`
-
-# Add default JVM options here. You can also use JAVA_OPTS and GRADLE_OPTS to pass JVM options to this script.
-DEFAULT_JVM_OPTS='"-Xmx64m" "-Xms64m"'
-
-# Use the maximum available, or set MAX_FD != -1 to use that value.
-MAX_FD="maximum"
-
-warn () {
-    echo "$*"
-}
-
-die () {
-    echo
-    echo "$*"
-    echo
-    exit 1
-}
-
-# OS specific support (must be 'true' or 'false').
-cygwin=false
-msys=false
-darwin=false
-nonstop=false
-case "`uname`" in
-  CYGWIN* )
-    cygwin=true
-    ;;
-  Darwin* )
-    darwin=true
-    ;;
-  MINGW* )
-    msys=true
-    ;;
-  NONSTOP* )
-    nonstop=true
-    ;;
-esac
-
-CLASSPATH=$APP_HOME/gradle/wrapper/gradle-wrapper.jar
-
-# Determine the Java command to use to start the JVM.
-if [ -n "$JAVA_HOME" ] ; then
-    if [ -x "$JAVA_HOME/jre/sh/java" ] ; then
-        # IBM's JDK on AIX uses strange locations for the executables
-        JAVACMD="$JAVA_HOME/jre/sh/java"
-    else
-        JAVACMD="$JAVA_HOME/bin/java"
-    fi
-    if [ ! -x "$JAVACMD" ] ; then
-        die "ERROR: JAVA_HOME is set to an invalid directory: $JAVA_HOME
-
-Please set the JAVA_HOME variable in your environment to match the
-location of your Java installation."
-    fi
-else
-    JAVACMD="java"
-    which java >/dev/null 2>&1 || die "ERROR: JAVA_HOME is not set and no 'java' command could be found in your PATH.
-
-Please set the JAVA_HOME variable in your environment to match the
-location of your Java installation."
-fi
-
-# Increase the maximum file descriptors if we can.
-if [ "$cygwin" = "false" -a "$darwin" = "false" -a "$nonstop" = "false" ] ; then
-    MAX_FD_LIMIT=`ulimit -H -n`
-    if [ $? -eq 0 ] ; then
-        if [ "$MAX_FD" = "maximum" -o "$MAX_FD" = "max" ] ; then
-            MAX_FD="$MAX_FD_LIMIT"
-        fi
-        ulimit -n $MAX_FD
-        if [ $? -ne 0 ] ; then
-            warn "Could not set maximum file descriptor limit: $MAX_FD"
-        fi
-    else
-        warn "Could not query maximum file descriptor limit: $MAX_FD_LIMIT"
-    fi
-fi
-
-# For Darwin, add options to specify how the application appears in the dock
-if $darwin; then
-    GRADLE_OPTS="$GRADLE_OPTS \"-Xdock:name=$APP_NAME\" \"-Xdock:icon=$APP_HOME/media/gradle.icns\""
-fi
-
-# For Cygwin, switch paths to Windows format before running java
-if $cygwin ; then
-    APP_HOME=`cygpath --path --mixed "$APP_HOME"`
-    CLASSPATH=`cygpath --path --mixed "$CLASSPATH"`
-    JAVACMD=`cygpath --unix "$JAVACMD"`
-
-    # We build the pattern for arguments to be converted via cygpath
-    ROOTDIRSRAW=`find -L / -maxdepth 1 -mindepth 1 -type d 2>/dev/null`
-    SEP=""
-    for dir in $ROOTDIRSRAW ; do
-        ROOTDIRS="$ROOTDIRS$SEP$dir"
-        SEP="|"
-    done
-    OURCYGPATTERN="(^($ROOTDIRS))"
-    # Add a user-defined pattern to the cygpath arguments
-    if [ "$GRADLE_CYGPATTERN" != "" ] ; then
-        OURCYGPATTERN="$OURCYGPATTERN|($GRADLE_CYGPATTERN)"
-    fi
-    # Now convert the arguments - kludge to limit ourselves to /bin/sh
-    i=0
-    for arg in "$@" ; do
-        CHECK=`echo "$arg"|egrep -c "$OURCYGPATTERN" -`
-        CHECK2=`echo "$arg"|egrep -c "^-"`                                 ### Determine if an option
-
-        if [ $CHECK -ne 0 ] && [ $CHECK2 -eq 0 ] ; then                    ### Added a condition
-            eval `echo args$i`=`cygpath --path --ignore --mixed "$arg"`
-        else
-            eval `echo args$i`="\"$arg\""
-        fi
-        i=$((i+1))
-    done
-    case $i in
-        (0) set -- ;;
-        (1) set -- "$args0" ;;
-        (2) set -- "$args0" "$args1" ;;
-        (3) set -- "$args0" "$args1" "$args2" ;;
-        (4) set -- "$args0" "$args1" "$args2" "$args3" ;;
-        (5) set -- "$args0" "$args1" "$args2" "$args3" "$args4" ;;
-        (6) set -- "$args0" "$args1" "$args2" "$args3" "$args4" "$args5" ;;
-        (7) set -- "$args0" "$args1" "$args2" "$args3" "$args4" "$args5" "$args6" ;;
-        (8) set -- "$args0" "$args1" "$args2" "$args3" "$args4" "$args5" "$args6" "$args7" ;;
-        (9) set -- "$args0" "$args1" "$args2" "$args3" "$args4" "$args5" "$args6" "$args7" "$args8" ;;
-    esac
-fi
-
-# Escape application args
-save () {
-    for i do printf %s\\n "$i" | sed "s/'/'\\\\''/g;1s/^/'/;\$s/\$/' \\\\/" ; done
-    echo " "
-}
-APP_ARGS=$(save "$@")
-
-# Collect all arguments for the java command, following the shell quoting and substitution rules
-eval set -- $DEFAULT_JVM_OPTS $JAVA_OPTS $GRADLE_OPTS "\"-Dorg.gradle.appname=$APP_BASE_NAME\"" -classpath "\"$CLASSPATH\"" org.gradle.wrapper.GradleWrapperMain "$APP_ARGS"
-
-# by default we should be in the correct project dir, but when run from Finder on Mac, the cwd is wrong
-if [ "$(uname)" = "Darwin" ] && [ "$HOME" = "$PWD" ]; then
-  cd "$(dirname "$0")"
-fi
-
-exec "$JAVACMD" "$@"

gradlew.bat

@@ -1,100 +0,0 @@
-@rem
-@rem Copyright 2015 the original author or authors.
-@rem
-@rem Licensed under the Apache License, Version 2.0 (the "License");
-@rem you may not use this file except in compliance with the License.
-@rem You may obtain a copy of the License at
-@rem
-@rem      http://www.apache.org/licenses/LICENSE-2.0
-@rem
-@rem Unless required by applicable law or agreed to in writing, software
-@rem distributed under the License is distributed on an "AS IS" BASIS,
-@rem WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
-@rem See the License for the specific language governing permissions and
-@rem limitations under the License.
-@rem
-
-@if "%DEBUG%" == "" @echo off
-@rem ##########################################################################
-@rem
-@rem  Gradle startup script for Windows
-@rem
-@rem ##########################################################################
-
-@rem Set local scope for the variables with windows NT shell
-if "%OS%"=="Windows_NT" setlocal
-
-set DIRNAME=%~dp0
-if "%DIRNAME%" == "" set DIRNAME=.
-set APP_BASE_NAME=%~n0
-set APP_HOME=%DIRNAME%
-
-@rem Add default JVM options here. You can also use JAVA_OPTS and GRADLE_OPTS to pass JVM options to this script.
-set DEFAULT_JVM_OPTS="-Xmx64m" "-Xms64m"
-
-@rem Find java.exe
-if defined JAVA_HOME goto findJavaFromJavaHome
-
-set JAVA_EXE=java.exe
-%JAVA_EXE% -version >NUL 2>&1
-if "%ERRORLEVEL%" == "0" goto init
-
-echo.
-echo ERROR: JAVA_HOME is not set and no 'java' command could be found in your PATH.
-echo.
-echo Please set the JAVA_HOME variable in your environment to match the
-echo location of your Java installation.
-
-goto fail
-
-:findJavaFromJavaHome
-set JAVA_HOME=%JAVA_HOME:"=%
-set JAVA_EXE=%JAVA_HOME%/bin/java.exe
-
-if exist "%JAVA_EXE%" goto init
-
-echo.
-echo ERROR: JAVA_HOME is set to an invalid directory: %JAVA_HOME%
-echo.
-echo Please set the JAVA_HOME variable in your environment to match the
-echo location of your Java installation.
-
-goto fail
-
-:init
-@rem Get command-line arguments, handling Windows variants
-
-if not "%OS%" == "Windows_NT" goto win9xME_args
-
-:win9xME_args
-@rem Slurp the command line arguments.
-set CMD_LINE_ARGS=
-set _SKIP=2
-
-:win9xME_args_slurp
-if "x%~1" == "x" goto execute
-
-set CMD_LINE_ARGS=%*
-
-:execute
-@rem Setup the command line
-
-set CLASSPATH=%APP_HOME%\gradle\wrapper\gradle-wrapper.jar
-
-@rem Execute Gradle
-"%JAVA_EXE%" %DEFAULT_JVM_OPTS% %JAVA_OPTS% %GRADLE_OPTS% "-Dorg.gradle.appname=%APP_BASE_NAME%" -classpath "%CLASSPATH%" org.gradle.wrapper.GradleWrapperMain %CMD_LINE_ARGS%
-
-:end
-@rem End local scope for the variables with windows NT shell
-if "%ERRORLEVEL%"=="0" goto mainEnd
-
-:fail
-rem Set variable GRADLE_EXIT_CONSOLE if you need the _script_ return code instead of
-rem the _cmd.exe /c_ return code!
-if  not "" == "%GRADLE_EXIT_CONSOLE%" exit 1
-exit /b 1
-
-:mainEnd
-if "%OS%"=="Windows_NT" endlocal
-
-:omega

kobalt/src/Build.kt

@@ -1,4 +1,3 @@
-
 import com.beust.kobalt.*
 import com.beust.kobalt.api.Project
 import com.beust.kobalt.api.annotation.Task
@@ -17,31 +16,22 @@ import java.io.File
 import java.nio.file.Files
 import java.nio.file.Paths
 import java.nio.file.StandardCopyOption
-import java.util.zip.ZipEntry
-import java.util.zip.ZipOutputStream
 
 val bs = buildScript {
-    repos("https://dl.bintray.com/cbeust/maven")
+    repos("http://dl.bintray.com/cbeust/maven")
 }
 
 object Versions {
-    val kotlin = "1.2.71"
-    val okhttp = "3.9.1"
-    val okio = "1.13.0"
-    val retrofit = "2.3.0"
-    val gson = "2.8.2"
-    val guice = "4.2.2"
-    val maven = "3.5.2"
-    val mavenResolver = "1.1.0"
+    val okhttp = "3.2.0"
+    val okio = "1.6.0"
+    val retrofit = "2.1.0"
+    val gson = "2.6.2"
+    val maven = "3.3.9"
+    val mavenResolver = "1.0.3"
     val slf4j = "1.7.3"
+    val kotlin = "1.1.1"
     val aether = "1.0.2.v20150114"
-    val testng = "6.12"
-    val jcommander = "1.72"
-
-    // JUnit 5
-    val junit = "4.12"
-    val junitPlatform = "1.1.0"
-    val junitJupiter = "5.1.0"
+    val testng = "6.11"
 }
 
 fun mavenResolver(vararg m: String)
@@ -64,7 +54,6 @@ val wrapper = project {
     }
 
     assemble {
-        jar { }
         jar {
             name = projectName + ".jar"
             manifest {
@@ -76,13 +65,6 @@ val wrapper = project {
     application {
         mainClass = "com.beust.kobalt.wrapper.Main"
     }
-
-    bintray {
-        publish = true
-        sign = true
-    }
-
-    pom = createPom(name, "Wrapper for Kobalt")
 }
 
 val kobaltPluginApi = project {
@@ -92,44 +74,50 @@ val kobaltPluginApi = project {
     version = readVersion()
     directory = "modules/kobalt-plugin-api"
     description = "A build system in Kotlin"
-    url = "https://beust.com/kobalt"
+    url = "http://beust.com/kobalt"
 
-    pom = createPom(name, "A build system in Kotlin")
+    pom = Model().apply {
+        name = project.name
+        description = "A build system in Kotlin"
+        url = "http://beust.com/kobalt"
+        licenses = listOf(License().apply {
+            name = "Apache 2.0"
+            url = "http://www.apache .org/licenses/LICENSE-2.0"
+        })
+        scm = Scm().apply {
+            url = "http://github.com/cbeust/kobalt"
+            connection = "https://github.com/cbeust/kobalt.git"
+            developerConnection = "git@github.com:cbeust/kobalt.git"
+        }
+        developers = listOf(Developer().apply {
+            name = "Cedric Beust"
+            email = "cedric@beust.com"
+        })
+    }
 
     dependencies {
         compile(
-                "org.jetbrains.kotlin:kotlin-stdlib:${Versions.kotlin}",
-                "com.google.inject:guice:${Versions.guice}",
-                "com.google.inject.extensions:guice-assistedinject:4.1.0",
+                "com.google.inject:guice:4.0",
+                "com.google.inject.extensions:guice-assistedinject:4.0",
                 "javax.inject:javax.inject:1",
-                "com.google.guava:guava:27.0.1-jre",
+                "com.google.guava:guava:19.0",
                 "org.apache.maven:maven-model:${Versions.maven}",
-                "io.reactivex:rxjava:1.3.3",
+                "io.reactivex:rxjava:1.1.5",
                 "com.squareup.okio:okio:${Versions.okio}",
                 "com.google.code.gson:gson:${Versions.gson}",
                 "com.squareup.okhttp3:okhttp:${Versions.okhttp}",
                 "com.squareup.retrofit2:retrofit:${Versions.retrofit}",
                 "com.squareup.retrofit2:converter-gson:${Versions.retrofit}",
-                "com.beust:jcommander:${Versions.jcommander}",
-                "org.eclipse.jgit:org.eclipse.jgit:4.9.0.201710071750-r",
+                "com.beust:jcommander:1.48",
+                "org.eclipse.jgit:org.eclipse.jgit:4.5.0.201609210915-r",
                 "org.slf4j:slf4j-simple:${Versions.slf4j}",
                 *mavenResolver("api", "spi", "util", "impl", "connector-basic", "transport-http", "transport-file"),
                 "org.apache.maven:maven-aether-provider:3.3.9",
-                "org.testng.testng-remote:testng-remote:1.3.2",
-                "org.testng:testng:${Versions.testng}",
-                "org.junit.platform:junit-platform-surefire-provider:${Versions.junitPlatform}",
-                "org.junit.platform:junit-platform-runner:${Versions.junitPlatform}",
-                "org.junit.platform:junit-platform-engine:${Versions.junitPlatform}",
-                "org.junit.platform:junit-platform-console:${Versions.junitPlatform}",
-                "org.junit.jupiter:junit-jupiter-engine:${Versions.junitJupiter}",
-                "org.junit.vintage:junit-vintage-engine:${Versions.junitJupiter}",
-                "org.apache.commons:commons-compress:1.15",
-                "commons-io:commons-io:2.6",
-
-                // Java 9
-                "javax.xml.bind:jaxb-api:2.3.0"
+                "org.testng.testng-remote:testng-remote:1.3.0",
+                "org.testng:testng:${Versions.testng}"
         )
         exclude(*aether("impl", "spi", "util", "api"))
+        compile("org.jetbrains.kotlin:kotlin-stdlib:1.1.1")
     }
 
 
@@ -142,8 +130,12 @@ val kobaltPluginApi = project {
         }
     }
 
+//    install {
+//        libDir = "lib-test"
+//    }
+
     kotlinCompiler {
-        args("nowarn")
+        args("-nowarn")
     }
 
     bintray {
@@ -162,32 +154,24 @@ val kobaltApp = project(kobaltPluginApi, wrapper) {
         compile("org.jetbrains.kotlin:kotlin-compiler-embeddable:${Versions.kotlin}")
 
         // Used by the main app
-        compile(
-                "org.jetbrains.kotlin:kotlin-stdlib:${Versions.kotlin}",
-                "com.github.spullara.mustache.java:compiler:0.9.5",
+        compile("com.github.spullara.mustache.java:compiler:0.9.1",
                 "javax.inject:javax.inject:1",
-                "com.google.inject:guice:${Versions.guice}",
-                "com.google.inject.extensions:guice-assistedinject:${Versions.guice}",
-                "com.beust:jcommander:${Versions.jcommander}",
+                "com.google.inject:guice:4.0",
+                "com.google.inject.extensions:guice-assistedinject:4.0",
+                "com.beust:jcommander:1.65",
                 "org.apache.maven:maven-model:${Versions.maven}",
-                "com.google.code.findbugs:jsr305:3.0.2",
+                "com.google.code.findbugs:jsr305:3.0.1",
                 "com.google.code.gson:gson:${Versions.gson}",
                 "com.squareup.retrofit2:retrofit:${Versions.retrofit}",
                 "com.squareup.retrofit2:converter-gson:${Versions.retrofit}",
-//                "com.squareup.okhttp3:okhttp-ws:3.4.2",
-                "biz.aQute.bnd:biz.aQute.bndlib:3.5.0",
+                "com.squareup.okhttp3:okhttp-ws:${Versions.okhttp}",
+                "biz.aQute.bnd:bndlib:2.4.0",
                 *mavenResolver("spi"),
 
-                "com.squareup.okhttp3:logging-interceptor:3.9.0",
+                "com.squareup.okhttp3:logging-interceptor:3.2.0",
 
-                "com.sparkjava:spark-core:2.6.0",
-                "org.codehaus.groovy:groovy:2.4.12",
-
-                // Java 9
-                "javax.xml.bind:jaxb-api:2.3.0",
-                "com.sun.xml.bind:jaxb-impl:2.3.0",
-                "com.sun.xml.bind:jaxb-core:2.3.0",
-                "com.sun.activation:javax.activation:1.2.0"
+                "com.sparkjava:spark-core:2.5",
+                "org.codehaus.groovy:groovy:2.4.8"
 
 //                "org.eclipse.jetty:jetty-server:${Versions.jetty}",
 //                "org.eclipse.jetty:jetty-servlet:${Versions.jetty}",
@@ -197,15 +181,16 @@ val kobaltApp = project(kobaltPluginApi, wrapper) {
 //                "org.glassfish.jersey.media:jersey-media-moxy:${Versions.jersey}",
 //                "org.wasabi:wasabi:0.1.182"
         )
+        compile("org.jetbrains.kotlin:kotlin-stdlib:1.1.1")
 
     }
 
     dependenciesTest {
-        compile("org.jetbrains.kotlin:kotlin-test:${Versions.kotlin}",
-                "org.testng:testng:${Versions.testng}",
-                "org.assertj:assertj-core:3.8.0",
+        compile("org.testng:testng:${Versions.testng}",
+                "org.assertj:assertj-core:3.4.1",
                 *mavenResolver("util")
                 )
+        compile("org.jetbrains.kotlin:kotlin-test:1.1.1")
     }
 
     assemble {
@@ -217,27 +202,17 @@ val kobaltApp = project(kobaltPluginApi, wrapper) {
         }
         zip {
             val dir = "kobalt-$version"
-            val files = listOf(
-                    "dist", "$dir/bin", "kobaltw",
-                    "dist", "$dir/bin", "kobaltw.bat",
-                    "$buildDirectory/libs", "$dir/kobalt/wrapper", "$projectName-$version.jar",
-                    "modules/wrapper/$buildDirectory/libs", "$dir/kobalt/wrapper", "$projectName-wrapper.jar")
-
-            (0 .. files.size - 1 step 3).forEach { i ->
-                include(from(files[i]), to(files[i + 1]), files[i + 2])
-            }
-
-            // Package the sources
-            val currentDir = Paths.get(".").toAbsolutePath().normalize().toString()
-            zipFolders("$currentDir/$buildDirectory/libs/all-sources/$projectName-$version-sources.jar",
-                    "$currentDir/$directory/src/main/kotlin",
-                    "$currentDir/${kobaltPluginApi.directory}/src/main/kotlin")
-            include(from("$buildDirectory/libs/all-sources"), to("$dir/kobalt/wrapper"), "$projectName-$version-sources.jar")
+            include(from("dist"), to("$dir/bin"), "kobaltw")
+            include(from("dist"), to("$dir/bin"), "kobaltw.bat")
+            include(from("$buildDirectory/libs"), to("$dir/kobalt/wrapper"),
+                    "$projectName-$version.jar")
+            include(from("modules/wrapper/$buildDirectory/libs"), to("$dir/kobalt/wrapper"),
+                    "$projectName-wrapper.jar")
         }
     }
 
     kotlinCompiler {
-        args("nowarn")
+        args("-nowarn")
     }
 
     bintray {
@@ -257,28 +232,6 @@ val kobaltApp = project(kobaltPluginApi, wrapper) {
     }
 }
 
-fun zipFolders(zipFilePath: String, vararg foldersPath: String) {
-    val zip = Paths.get(zipFilePath)
-    Files.deleteIfExists(zip)
-    Files.createDirectories(zip.parent)
-    val zipPath = Files.createFile(zip)
-    ZipOutputStream(Files.newOutputStream(zipPath)).use {
-        foldersPath.map {Paths.get(it)}.forEach { folderPath ->
-            Files.walk(folderPath)
-                    .filter { path -> !Files.isDirectory(path) }
-                    .forEach { path ->
-                        val zipEntry = ZipEntry(folderPath.relativize(path).toString())
-                        try {
-                            it.putNextEntry(zipEntry)
-                            Files.copy(path, it)
-                            it.closeEntry()
-                        } catch (e: Exception) {
-                        }
-                    }
-        }
-    }
-}
-
 fun readVersion() : String {
     val localFile =
             listOf("src/main/resources/kobalt.properties",
@@ -305,22 +258,3 @@ fun taskCopyVersionForWrapper(project: Project) : TaskResult {
     }
     return TaskResult()
 }
-
-fun createPom(projectName: String, projectDescription: String) = Model().apply {
-    name = projectName
-    description = projectDescription
-    url = "https://beust.com/kobalt"
-    licenses = listOf(License().apply {
-        name = "Apache-2.0"
-        url = "https://www.apache.org/licenses/LICENSE-2.0"
-    })
-    scm = Scm().apply {
-        url = "https://github.com/cbeust/kobalt"
-        connection = "https://github.com/cbeust/kobalt.git"
-        developerConnection = "git@github.com:cbeust/kobalt.git"
-    }
-    developers = listOf(Developer().apply {
-        name = "Cedric Beust"
-        email = "cedric@beust.com"
-    })
-}

kobalt/wrapper/kobalt-wrapper.properties

@@ -1 +1 @@
-kobalt.version=1.0.122
+kobalt.version=1.0.46

kobaltw-test

@@ -1,8 +0,0 @@
-#!/usr/bin/env sh
-JAR=$(ls -1 -t kobaltBuild/libs/*.jar | grep -Ev "(sources|javadoc)" | head -1)
-TEMPDIR=$(mktemp -d)
-cp -pf "$JAR" "$TEMPDIR"
-TEMPJAR=$TEMPDIR/$(basename "$JAR")
-export KOBALT_JAR=$TEMPJAR
-java -jar "$TEMPJAR" "$@"
-rm -rf "$TEMPDIR"

modules/kobalt-plugin-api/build.gradle

@@ -1,85 +0,0 @@
-plugins {
-    id 'org.jetbrains.kotlin.jvm' version '1.2.71'
-    id 'com.github.johnrengelman.shadow' version '5.0.0'
-}
-
-dependencies {
-    implementation "biz.aQute.bnd:biz.aQute.bndlib:$bndlib"
-    implementation "com.google.code.findbugs:jsr305:$findbugs"
-    implementation "com.sparkjava:spark-core:$spark"
-    implementation "com.squareup.okhttp3:logging-interceptor:$okhttp"
-    implementation 'commons-io:commons-io:2.6'
-    implementation 'io.reactivex:rxjava:1.3.3'
-    implementation "javax.inject:javax.inject:$inject"
-    implementation "javax.xml.bind:jaxb-api:$jaxb"
-    implementation 'org.apache.commons:commons-compress:1.15'
-    implementation 'org.apache.maven:maven-aether-provider:3.3.9'
-    implementation "org.apache.maven.resolver:maven-resolver-api:$mavenResolver"
-    implementation "org.apache.maven.resolver:maven-resolver-connector-basic:$mavenResolver"
-    implementation "org.apache.maven.resolver:maven-resolver-impl:$mavenResolver"
-    implementation "org.apache.maven.resolver:maven-resolver-spi:$mavenResolver"
-    implementation "org.apache.maven.resolver:maven-resolver-transport-file:$mavenResolver"
-    implementation "org.apache.maven.resolver:maven-resolver-transport-http:$mavenResolver"
-    implementation "org.apache.maven.resolver:maven-resolver-util:$mavenResolver"
-    implementation "org.codehaus.groovy:groovy:$groovy"
-    implementation 'org.eclipse.jgit:org.eclipse.jgit:4.9.0.201710071750-r'
-    implementation "org.junit.jupiter:junit-jupiter-engine:$junitJupiter"
-    implementation "org.junit.platform:junit-platform-console:$junitPlatform"
-    implementation "org.junit.platform:junit-platform-engine:$junitPlatform"
-    implementation "org.junit.platform:junit-platform-runner:$junitPlatform"
-    implementation "org.junit.platform:junit-platform-surefire-provider:$junitPlatform"
-    implementation "org.junit.vintage:junit-vintage-engine:$junitJupiter"
-    implementation "org.slf4j:slf4j-simple:$slf4j"
-    implementation "org.testng:testng:$testng"
-    implementation 'org.testng.testng-remote:testng-remote:1.3.2'
-    implementation "com.beust:jcommander:$jcommander"
-    implementation "com.google.code.gson:gson:$gson"
-    implementation "com.google.inject:guice:$guice"
-    implementation "com.google.inject.extensions:guice-assistedinject:$guice"
-    implementation "com.squareup.okio:okio:$okio"
-    implementation "com.squareup.retrofit2:converter-gson:$retrofit"
-    implementation "com.squareup.retrofit2:retrofit:$retrofit"
-    implementation "org.apache.maven:maven-model:$maven"
-    implementation "org.jetbrains.kotlin:kotlin-stdlib:$kotlin"
-}
-
-shadowJar {
-    classifier = null
-}
-
-test {
-    useTestNG()
-}
-
-publishing {
-    publications {
-        shadow(MavenPublication) { publication ->
-            project.shadow.component(publication)
-            artifact sourcesJar
-            artifact javadocJar
-
-            pom {
-                name = project.name
-                description = 'A build system in Kotlin'
-                url = 'https://beust.com/kobalt'
-                licenses {
-                    license {
-                        name = 'Apache-2.0'
-                        url = 'https://www.apache.org/licenses/LICENSE-2.0'
-                    }
-                }
-                developers {
-                    developer {
-                        name = 'Cedric Beust'
-                        email = 'cedric@beust.com'
-                    }
-                }
-                scm {
-                    connection = 'scm:https://github.com/cbeust/kobalt.git'
-                    developerConnection = 'scm:git@github.com:cbeust/kobalt.git'
-                    url = 'https://github.com/cbeust/kobalt'
-                }
-            }
-        }
-    }
-}

modules/kobalt-plugin-api/pom.xml

@@ -1,279 +0,0 @@
-<project xmlns="http://maven.apache.org/POM/4.0.0" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
-         xsi:schemaLocation="http://maven.apache.org/POM/4.0.0 http://maven.apache.org/xsd/maven-4.0.0.xsd">
-    <modelVersion>4.0.0</modelVersion>
-    <parent>
-        <groupId>com.beust</groupId>
-        <artifactId>kobalt-pom</artifactId>
-        <version>1.1.0</version>
-        <relativePath>../..</relativePath>
-    </parent>
-
-    <artifactId>kobalt-plugin-api</artifactId>
-    <packaging>jar</packaging>
-    <version>1.1.0</version>
-
-    <dependencies>
-        <dependency>
-            <groupId>org.jetbrains.kotlin</groupId>
-            <artifactId>kotlin-stdlib</artifactId>
-            <version>${kotlin.version}</version>
-        </dependency>
-        <dependency>
-            <groupId>org.apache.maven</groupId>
-            <artifactId>maven-aether-provider</artifactId>
-            <version>3.3.9</version>
-            <exclusions>
-                <exclusion>
-                    <groupId>org.eclipse.aether</groupId>
-                    <artifactId>impl</artifactId>
-                </exclusion>
-                <exclusion>
-                    <groupId>org.eclipse.aether</groupId>
-                    <artifactId>spi</artifactId>
-                </exclusion>
-                <exclusion>
-                    <groupId>org.eclipse.aether</groupId>
-                    <artifactId>util</artifactId>
-                </exclusion>
-                <exclusion>
-                    <groupId>org.eclipse.aether</groupId>
-                    <artifactId>api</artifactId>
-                </exclusion>
-            </exclusions>
-        </dependency>
-        <dependency>
-            <groupId>org.apache.maven.resolver</groupId>
-            <artifactId>maven-resolver-api</artifactId>
-            <version>${mavenresolver.version}</version>
-        </dependency>
-        <dependency>
-            <groupId>org.apache.maven.resolver</groupId>
-            <artifactId>maven-resolver-spi</artifactId>
-            <version>${mavenresolver.version}</version>
-        </dependency>
-        <dependency>
-            <groupId>org.apache.maven.resolver</groupId>
-            <artifactId>maven-resolver-util</artifactId>
-            <version>${mavenresolver.version}</version>
-        </dependency>
-        <dependency>
-            <groupId>org.apache.maven.resolver</groupId>
-            <artifactId>maven-resolver-impl</artifactId>
-            <version>${mavenresolver.version}</version>
-        </dependency>
-        <dependency>
-            <groupId>org.apache.maven.resolver</groupId>
-            <artifactId>maven-resolver-connector-basic</artifactId>
-            <version>${mavenresolver.version}</version>
-        </dependency>
-        <dependency>
-            <groupId>org.apache.maven.resolver</groupId>
-            <artifactId>maven-resolver-transport-http</artifactId>
-            <version>${mavenresolver.version}</version>
-        </dependency>
-        <dependency>
-            <groupId>org.apache.maven.resolver</groupId>
-            <artifactId>maven-resolver-transport-file</artifactId>
-            <version>${mavenresolver.version}</version>
-        </dependency>
-        <dependency>
-            <groupId>io.reactivex</groupId>
-            <artifactId>rxjava</artifactId>
-            <version>1.3.3</version>
-        </dependency>
-        <dependency>
-            <groupId>com.squareup.okio</groupId>
-            <artifactId>okio</artifactId>
-            <version>${okio.version}</version>
-        </dependency>
-        <dependency>
-            <groupId>javax.inject</groupId>
-            <artifactId>javax.inject</artifactId>
-            <version>1</version>
-            <scope>compile</scope>
-        </dependency>
-        <dependency>
-            <groupId>com.google.inject</groupId>
-            <artifactId>guice</artifactId>
-            <version>4.2.2</version>
-        </dependency>
-        <dependency>
-            <groupId>com.google.inject.extensions</groupId>
-            <artifactId>guice-assistedinject</artifactId>
-            <version>4.2.2</version>
-        </dependency>
-        <dependency>
-            <groupId>com.beust</groupId>
-            <artifactId>jcommander</artifactId>
-            <version>1.72</version>
-        </dependency>
-        <dependency>
-            <groupId>org.apache.maven</groupId>
-            <artifactId>maven-model</artifactId>
-            <version>3.5.2</version>
-        </dependency>
-        <dependency>
-            <groupId>com.google.code.findbugs</groupId>
-            <artifactId>jsr305</artifactId>
-            <version>3.0.2</version>
-        </dependency>
-        <dependency>
-            <groupId>com.google.code.gson</groupId>
-            <artifactId>gson</artifactId>
-            <version>2.8.2</version>
-        </dependency>
-        <dependency>
-            <groupId>com.squareup.retrofit2</groupId>
-            <artifactId>retrofit</artifactId>
-            <version>2.3.0</version>
-        </dependency>
-        <dependency>
-            <groupId>com.squareup.retrofit2</groupId>
-            <artifactId>converter-gson</artifactId>
-            <version>2.3.0</version>
-        </dependency>
-        <dependency>
-            <groupId>biz.aQute.bnd</groupId>
-            <artifactId>biz.aQute.bndlib</artifactId>
-            <version>3.5.0</version>
-        </dependency>
-        <dependency>
-            <groupId>com.squareup.okhttp3</groupId>
-            <artifactId>logging-interceptor</artifactId>
-            <version>${okhttp3.version}</version>
-        </dependency>
-        <dependency>
-            <groupId>com.sparkjava</groupId>
-            <artifactId>spark-core</artifactId>
-            <version>2.6.0</version>
-        </dependency>
-        <dependency>
-            <groupId>org.codehaus.groovy</groupId>
-            <artifactId>groovy</artifactId>
-            <version>2.4.12</version>
-        </dependency>
-        <dependency>
-            <groupId>org.apache.commons</groupId>
-            <artifactId>commons-compress</artifactId>
-            <version>1.15</version>
-        </dependency>
-        <dependency>
-            <groupId>commons-io</groupId>
-            <artifactId>commons-io</artifactId>
-            <version>2.6</version>
-        </dependency>
-        <dependency>
-            <groupId>org.junit.platform</groupId>
-            <artifactId>junit-platform-surefire-provider</artifactId>
-            <version>${junit.version}</version>
-        </dependency>
-        <dependency>
-            <groupId>org.junit.platform</groupId>
-            <artifactId>junit-platform-runner</artifactId>
-            <version>${junit.version}</version>
-        </dependency>
-        <dependency>
-            <groupId>org.junit.platform</groupId>
-            <artifactId>junit-platform-engine</artifactId>
-            <version>${junit.version}</version>
-        </dependency>
-        <dependency>
-            <groupId>org.junit.platform</groupId>
-            <artifactId>junit-platform-console</artifactId>
-            <version>${junit.version}</version>
-        </dependency>
-        <dependency>
-            <groupId>org.junit.jupiter</groupId>
-            <artifactId>junit-jupiter-engine</artifactId>
-            <version>${junitJupiter.version}</version>
-        </dependency>
-        <dependency>
-            <groupId>org.junit.vintage</groupId>
-            <artifactId>junit-vintage-engine</artifactId>
-            <version>${junitJupiter.version}</version>
-        </dependency>
-        <dependency>
-            <groupId>org.testng.testng-remote</groupId>
-            <artifactId>testng-remote</artifactId>
-            <version>1.3.2</version>
-        </dependency>
-        <dependency>
-            <groupId>org.testng</groupId>
-            <artifactId>testng</artifactId>
-            <version>${testng.version}</version>
-        </dependency>
-        <dependency>
-            <groupId>org.eclipse.jgit</groupId>
-            <artifactId>org.eclipse.jgit</artifactId>
-            <version>4.9.0.201710071750-r</version>
-        </dependency>
-        <dependency>
-            <groupId>org.slf4j</groupId>
-            <artifactId>slf4j-simple</artifactId>
-            <version>${slf4j.version}</version>
-        </dependency>
-        <!-- java 9 -->
-        <dependency>
-            <groupId>javax.xml.bind</groupId>
-            <artifactId>jaxb-api</artifactId>
-            <version>2.3.0</version>
-        </dependency>
-    </dependencies>
-
-    <build>
-        <plugins>
-            <plugin>
-                <groupId>org.jetbrains.kotlin</groupId>
-                <artifactId>kotlin-maven-plugin</artifactId>
-                <version>${kotlin.version}</version>
-                <executions>
-                    <execution>
-                        <id>compile</id>
-                        <goals> <goal>compile</goal> </goals>
-                        <configuration>
-                            <sourceDirs>
-                                <sourceDir>${project.basedir}/src/main/kotlin</sourceDir>
-                            </sourceDirs>
-                        </configuration>
-                    </execution>
-                    <execution>
-                        <id>test-compile</id>
-                        <goals> <goal>test-compile</goal> </goals>
-                        <configuration>
-                            <sourceDirs>
-                                <sourceDir>${project.basedir}/src/test/kotlin</sourceDir>
-                            </sourceDirs>
-                        </configuration>
-                    </execution>
-                </executions>
-            </plugin>
-            <plugin>
-                <groupId>org.apache.maven.plugins</groupId>
-                <artifactId>maven-compiler-plugin</artifactId>
-                <version>3.5.1</version>
-                <executions>
-                    <!-- Replacing default-compile as it is treated specially by maven -->
-                    <execution>
-                        <id>default-compile</id>
-                        <phase>none</phase>
-                    </execution>
-                    <!-- Replacing default-testCompile as it is treated specially by maven -->
-                    <execution>
-                        <id>default-testCompile</id>
-                        <phase>none</phase>
-                    </execution>
-                    <execution>
-                        <id>java-compile</id>
-                        <phase>compile</phase>
-                        <goals> <goal>compile</goal> </goals>
-                    </execution>
-                    <execution>
-                        <id>java-test-compile</id>
-                        <phase>test-compile</phase>
-                        <goals> <goal>testCompile</goal> </goals>
-                    </execution>
-                </executions>
-            </plugin>
-        </plugins>
-    </build>
-</project>

modules/kobalt-plugin-api/src/main/kotlin/com/beust/kobalt/ArchiveGenerator.kt

@@ -3,6 +3,7 @@ package com.beust.kobalt
 import com.beust.kobalt.api.KobaltContext
 import com.beust.kobalt.api.Project
 import com.beust.kobalt.archive.Zip
+import com.beust.kobalt.misc.IncludedFile
 import com.beust.kobalt.misc.KFiles
 import java.io.File
 

modules/kobalt-plugin-api/src/main/kotlin/com/beust/kobalt/Args.kt

@@ -61,9 +61,6 @@ class Args {
     @Parameter(names = arrayOf("--noIncremental"), description = "Turn off incremental builds")
     var noIncremental: Boolean = false
 
-    @Parameter(names = arrayOf("--offline"), description = "Don't try to download dependencies even if there is no cached version")
-    var offline: Boolean = false
-
     @Parameter(names = arrayOf("--plugins"), description = "Comma-separated list of plug-in Maven id's")
     var pluginIds: String? = null
 
@@ -104,8 +101,5 @@ class Args {
 
     @Parameter(names = arrayOf("--update"), description = "Update to the latest version of Kobalt")
     var update: Boolean = false
-
-    @Parameter(names = arrayOf("--version"), description = "Display the current version of Kobalt")
-    var version: Boolean = false
 }
 

modules/kobalt-plugin-api/src/main/kotlin/com/beust/kobalt/BuildScript.kt

@@ -74,18 +74,8 @@ data class ProxyConfig(val host: String = "", val port: Int = 0, val type: Strin
     fun toAetherProxy() = Proxy(type, host, port) // TODO make support for proxy auth
 }
 
-data class HostConfig(var url: String = "", var name: String = HostConfig.createRepoName(url),
-        var username: String? = null, var password: String? = null) {
-
-    companion object {
-        /**
-         * For repos specified in the build file (repos()) that don't have an associated unique name,
-         * create such a name from the URL. This is a requirement from Maven Resolver, and failing to do
-         * this leads to very weird resolution errors.
-         */
-        private fun createRepoName(url: String) = url.replace("/", "_").replace("\\", "_").replace(":", "_")
-    }
-
+data class HostConfig(var url: String = "", var name: String = url, var username: String? = null,
+        var password: String? = null) {
     fun hasAuth() : Boolean {
         return (! username.isNullOrBlank()) && (! password.isNullOrBlank())
     }
@@ -116,7 +106,6 @@ fun buildFileClasspath(vararg deps: String) {
 }
 
 fun newBuildFileClasspath(vararg deps: String) {
-    //FIXME newBuildFileClasspath called twice
     deps.forEach { Kobalt.addBuildFileClasspath(it) }
 }
 
@@ -126,7 +115,7 @@ fun authRepos(vararg repos : HostConfig) {
 }
 
 @Directive
-fun authRepo(init: HostConfig.() -> Unit) = HostConfig(name = "").apply { init() }
+fun authRepo(init: HostConfig.() -> Unit) = HostConfig().apply { init() }
 
 @Directive
 fun glob(g: String) : IFileSpec.GlobSpec = IFileSpec.GlobSpec(g)

modules/kobalt-plugin-api/src/main/kotlin/com/beust/kobalt/Constants.kt

@@ -9,13 +9,13 @@ object Constants {
     val BUILD_FILE_NAME = "Build.kt"
     val BUILD_FILE_DIRECTORY = "kobalt/src"
     val BUILD_FILE_PATH = KFiles.joinDir(BUILD_FILE_DIRECTORY, BUILD_FILE_NAME)
-    val KOTLIN_COMPILER_VERSION = "1.2.70"
+    val KOTLIN_COMPILER_VERSION = "1.1.1"
 
     internal val DEFAULT_REPOS = listOf<HostConfig>(
             //            "https://maven-central.storage.googleapis.com/",
-            HostConfig("https://repo1.maven.org/maven2/", "Maven"),
+            HostConfig("http://repo1.maven.org/maven2/", "Maven"),
             HostConfig("https://jcenter.bintray.com/", "JCenter")
-//            "https://repository.jetbrains.com/all/", // <-- contains snapshots
+//            "http://repository.jetbrains.com/all/", // <-- contains snapshots
 
             // snapshots
 //            "https://oss.sonatype.org/content/repositories/snapshots/"

modules/kobalt-plugin-api/src/main/kotlin/com/beust/kobalt/FileSpec.kt

@@ -28,15 +28,15 @@ sealed class IFileSpec {
         private fun isIncluded(includeMatchers: Glob, excludes: List<Glob>, rel: Path) : Boolean {
             excludes.forEach {
                 if (it.matches(rel)) {
-                    kobaltLog(3, "  Excluding ${rel.toFile()}")
+                    kobaltLog(3, "Excluding ${rel.toFile()}")
                     return false
                 }
             }
             if (includeMatchers.matches(rel)) {
-                kobaltLog(3, "  Including ${rel.toFile().path}")
+                kobaltLog(3, "Including ${rel.toFile().path}")
                 return true
             }
-            kobaltLog(2, "  Excluding ${rel.toFile()} (not matching any include pattern")
+            kobaltLog(2, "Excluding ${rel.toFile()} (not matching any include pattern")
             return false
         }
 

modules/kobalt-plugin-api/src/main/kotlin/com/beust/kobalt/IncludeFromTo.kt

@@ -1,43 +0,0 @@
-package com.beust.kobalt
-
-import com.beust.kobalt.api.annotation.Directive
-import java.io.File
-
-/**
- * Base classes for directives that support install(from,to) (e.g. install{} or jar{}).
- */
-open class IncludeFromTo {
-    /**
-     * Prefix path to be removed from the zip file. For example, if you add "build/lib/a.jar" to the zip
-     * file and the excludePrefix is "build/lib", then "a.jar" will be added at the root of the zip file.
-     */
-    val includedFiles = arrayListOf<IncludedFile>()
-
-    @Directive
-    fun from(s: String) = From(s)
-
-    @Directive
-    fun to(s: String) = To(s)
-
-    @Directive
-    fun copy(from: From, to: To) {
-        val dir = File(from.path).absoluteFile.parentFile
-        includedFiles.add(IncludedFile(from(dir.absolutePath), to, listOf(IFileSpec.FileSpec(from.path))))
-    }
-
-    @Directive
-    fun include(vararg files: String) {
-        includedFiles.add(IncludedFile(files.map { IFileSpec.FileSpec(it) }))
-    }
-
-    @Directive
-    fun include(from: From, to: To, vararg specs: String) {
-        includedFiles.add(IncludedFile(from, to, specs.map { IFileSpec.FileSpec(it) }))
-    }
-
-    @Directive
-    fun include(from: From, to: To, vararg specs: IFileSpec.GlobSpec) {
-        includedFiles.add(IncludedFile(from, to, listOf(*specs)))
-    }
-}
-

modules/kobalt-plugin-api/src/main/kotlin/com/beust/kobalt/IncludedFile.kt

@@ -1,44 +0,0 @@
-package com.beust.kobalt
-
-import com.beust.kobalt.misc.KFiles
-import com.beust.kobalt.misc.toString
-import java.io.File
-import java.nio.file.Paths
-
-class IncludedFile(val fromOriginal: From, val toOriginal: To, val specs: List<IFileSpec>,
-        val expandJarFiles: Boolean = false) {
-    constructor(specs: List<IFileSpec>, expandJarFiles: Boolean = false) : this(From(""), To(""), specs, expandJarFiles)
-    fun from(s: String) = File(if (fromOriginal.isCurrentDir()) s else KFiles.joinDir(from, s))
-    val from: String get() = fromOriginal.path.replace("\\", "/")
-    fun to(s: String) = File(if (toOriginal.isCurrentDir()) s else KFiles.joinDir(to, s))
-    val to: String get() = toOriginal.path.replace("\\", "/")
-    override fun toString() = toString("IncludedFile",
-            "files - ", specs.map { it.toString() },
-            "from", from,
-            "to", to)
-
-    fun allFromFiles(directory: String? = null): List<File> {
-        val result = arrayListOf<File>()
-        specs.forEach { spec ->
-//            val fullDir = if (directory == null) from else KFiles.joinDir(directory, from)
-            spec.toFiles(directory, from).forEach { source ->
-                result.add(if (source.isAbsolute) source else File(source.path))
-            }
-        }
-        return result.map { Paths.get(it.path).normalize().toFile()}
-    }
-}
-
-open class Direction(open val p: String) {
-    override fun toString() = path
-    fun isCurrentDir() = path == "./"
-
-    val path: String get() =
-        if (p.isEmpty()) "./"
-        else if (p.startsWith("/") || p.endsWith("/")) p
-        else p + "/"
-}
-
-class From(override val p: String) : Direction(p)
-
-class To(override val p: String) : Direction(p)

modules/kobalt-plugin-api/src/main/kotlin/com/beust/kobalt/JarGenerator.kt

@@ -3,16 +3,16 @@ package com.beust.kobalt
 import com.beust.kobalt.api.KobaltContext
 import com.beust.kobalt.api.Project
 import com.beust.kobalt.archive.Archives
-import com.beust.kobalt.archive.MetaArchive
 import com.beust.kobalt.archive.Zip
 import com.beust.kobalt.maven.DependencyManager
 import com.beust.kobalt.maven.aether.Scope
-import com.beust.kobalt.misc.KFiles
-import com.beust.kobalt.misc.kobaltLog
+import com.beust.kobalt.misc.*
 import com.google.inject.Inject
 import java.io.File
 import java.io.FileInputStream
+import java.io.OutputStream
 import java.nio.file.Paths
+import java.util.jar.JarOutputStream
 import java.util.jar.Manifest
 
 class JarGenerator @Inject constructor(val dependencyManager: DependencyManager) : ArchiveGenerator {
@@ -142,7 +142,7 @@ class JarGenerator @Inject constructor(val dependencyManager: DependencyManager)
                     val allFiles = includedFiles.flatMap { file ->
                         file.allFromFiles(project.directory).map { file.from(it.path) }
                     }
-                    val manifestFiles = allFiles.filter { it.path.contains(MetaArchive.MANIFEST_MF) }
+                    val manifestFiles = allFiles.filter { it.path.contains("META-INF/MANIFEST.MF") }
                     return if (manifestFiles.any()) manifestFiles[0] else null
                 }
 
@@ -151,12 +151,14 @@ class JarGenerator @Inject constructor(val dependencyManager: DependencyManager)
                     context.logger.log(project.name, 2, "Including MANIFEST.MF file $manifestFile")
                     Manifest(FileInputStream(manifestFile))
                 } else {
-                    null
+                    Manifest()
                 }
             }
 
+        val jarFactory = { os: OutputStream -> JarOutputStream(os, manifest) }
+
         return Archives.generateArchive(project, context, zip.name, ".jar", includedFiles,
-                true /* expandJarFiles */, manifest)
+                true /* expandJarFiles */, jarFactory)
     }
 
 }

modules/kobalt-plugin-api/src/main/kotlin/com/beust/kobalt/Jvm.kt

@@ -67,7 +67,7 @@ open class Jvm constructor(
             return toolsJar
         }
         if (javaHome!!.name.equals("jre", true)) {
-            _javaHome = javaHome!!.parentFile
+            javaHome = javaHome!!.parentFile
             toolsJar = File(javaHome, "lib/tools.jar")
             if (toolsJar.exists()) {
                 return toolsJar
@@ -78,7 +78,7 @@ open class Jvm constructor(
             val version = SystemProperties.Companion.javaVersion
             if (javaHome!!.name.toRegex().matches("jre\\d+")
                     || javaHome!!.name == "jre$version") {
-                _javaHome = File(javaHome!!.parentFile, "jdk$version")
+                javaHome = File(javaHome!!.parentFile, "jdk$version")
                 toolsJar = File(javaHome, "lib/tools.jar")
                 if (toolsJar.exists()) {
                     return toolsJar

modules/kobalt-plugin-api/src/main/kotlin/com/beust/kobalt/Plugins.kt

@@ -28,6 +28,7 @@ class Plugins @Inject constructor (val taskManagerProvider : Provider<TaskManage
         val depManager: DependencyManager,
         val settings: KobaltSettings,
         val executors: KobaltExecutors,
+        val pluginInfo: PluginInfo,
         val incrementalManagerFactory: IncrementalManager.IFactory,
         val taskManager: TaskManager) {
 
@@ -170,9 +171,6 @@ class Plugins @Inject constructor (val taskManagerProvider : Provider<TaskManage
 
     val dependencies = arrayListOf<IClasspathDependency>()
 
-//    @Inject
-//    lateinit var pluginInfo: PluginInfo
-
     fun installPlugins(dependencies: List<IClasspathDependency>, scriptClassLoader: ClassLoader) {
         val executor = executors.newExecutor("Plugins", 5)
         dependencies.forEach {
@@ -193,8 +191,6 @@ class Plugins @Inject constructor (val taskManagerProvider : Provider<TaskManage
                 // The plug-in is pointing to a jar file, read kobalt-plugin.xml from it
                 JarUtils.extractTextFile(JarFile(file), PluginInfo.PLUGIN_XML)
             }
-
-            val pluginInfo = Kobalt.INJECTOR.getInstance(PluginInfo::class.java)
             if (pluginXml != null) {
                 val pluginClassLoader = URLClassLoader(arrayOf(file.toURI().toURL()))
                 val thisPluginInfo = PluginInfo.readPluginXml(pluginXml, pluginClassLoader, scriptClassLoader)

modules/kobalt-plugin-api/src/main/kotlin/com/beust/kobalt/SystemProperties.kt

@@ -2,16 +2,8 @@ package com.beust.kobalt
 
 class SystemProperties {
     companion object {
-        val javaBase : String
-            get() {
-                val jh = System.getenv("JAVA_HOME")
-                    ?: System.getProperty("java.home")
-                    ?: throw IllegalArgumentException("JAVA_HOME not defined")
-                val result =
-                    if (jh.toLowerCase().endsWith("jre")) jh.substring(0, jh.length - 4)
-                    else jh
-                return result
-            }
+        val javaBase = System.getProperty("java.home") ?:
+                (System.getenv("JAVA_HOME") ?: throw IllegalArgumentException("JAVA_HOME not defined"))
         val javaVersion = System.getProperty("java.version")
         val homeDir = System.getProperty("user.home")
         val tmpDir = System.getProperty("java.io.tmpdir")

modules/kobalt-plugin-api/src/main/kotlin/com/beust/kobalt/TaskResult.kt

@@ -1,8 +1,3 @@
 package com.beust.kobalt
 
-class TestResult(val success: Boolean, val shortMessage: String? = null, val longMessage: String? = null)
-
-open class TaskResult(val success: Boolean = true,
-        val testResult: TestResult? = null,
-        val errorMessage: String? = null
-)
+open public class TaskResult(val success: Boolean = true, val errorMessage: String? = null)

modules/kobalt-plugin-api/src/main/kotlin/com/beust/kobalt/Variant.kt

@@ -126,62 +126,61 @@ class Variant(val initialProductFlavor: ProductFlavorConfig? = null,
 
     var generatedSourceDirectory: File? = null
 
-    private fun findBuildTypeBuildConfig(project: Project, variant: Variant?) : BuildConfig? {
-        val buildTypeName = variant?.buildType?.name
-        return project.buildTypes[buildTypeName]?.buildConfig
-    }
-
-    private fun findProductFlavorBuildConfig(project: Project, variant: Variant?) : BuildConfig? {
-        val buildTypeName = variant?.productFlavor?.name
-        return project.productFlavors[buildTypeName]?.buildConfig
-    }
+//    private fun findBuildTypeBuildConfig(project: Project, variant: Variant?) : BuildConfig? {
+//        val buildTypeName = variant?.buildType?.name
+//        return project.buildTypes[buildTypeName]?.buildConfig
+//    }
+//
+//    private fun findProductFlavorBuildConfig(project: Project, variant: Variant?) : BuildConfig? {
+//        val buildTypeName = variant?.productFlavor?.name
+//        return project.productFlavors[buildTypeName]?.buildConfig
+//    }
 
     /**
      * Return a list of the BuildConfigs found on the productFlavor{}, buildType{} and project{} (in that order).
      */
-    private fun findBuildConfigs(project: Project, variant: Variant?) : List<BuildConfig> {
-        val result = listOf(
-                findBuildTypeBuildConfig(project, variant),
-                findProductFlavorBuildConfig(project, variant),
-                project.buildConfig)
-            .filterNotNull()
-
-        return result
-    }
+//    private fun findBuildConfigs(project: Project, variant: Variant?) : List<BuildConfig> {
+//        val result = listOf(
+//                findBuildTypeBuildConfig(project, variant),
+//                findProductFlavorBuildConfig(project, variant),
+//                project.buildConfig)
+//            .filterNotNull()
+//
+//        return result
+//    }
 
     /**
      * Generate BuildConfig.java if requested. Also look up if any BuildConfig is defined on the current build type,
      * product flavor or main project, and use them to generateAndSave any additional field (in that order to
      * respect the priorities). Return the generated file if it was generated, null otherwise.
      */
-    fun maybeGenerateBuildConfig(project: Project, context: KobaltContext) : File? {
-        val buildConfigs = findBuildConfigs(project, this)
-
-        if (buildConfigs.size > 0) {
-            val pkg = project.packageName ?: project.group
-                    ?: throw KobaltException(
-                    "packageName needs to be defined on the project in order to generateAndSave BuildConfig")
-
-            val contributor = ActorUtils.selectAffinityActor(project, context,
-                    context.pluginInfo.buildConfigContributors)
-            if (contributor != null) {
-                val code = contributor.generateBuildConfig(project, context, pkg, this, buildConfigs)
-                val result = KFiles.makeDir(KFiles.generatedSourceDir(project, this, "buildConfig"))
-                // Make sure the generatedSourceDirectory doesn't contain the project.directory since
-                // that directory will be added when trying to find recursively all the sources in it
-                generatedSourceDirectory = result.relativeTo(File(project.directory))
-                val outputGeneratedSourceDirectory = File(result, pkg.replace('.', File.separatorChar))
-                val outputDir = File(outputGeneratedSourceDirectory, "BuildConfig." + contributor.buildConfigSuffix)
-                KFiles.saveFile(outputDir, code)
-                context.logger.log(project.name, 2, "Generated ${outputDir.path}")
-                return result
-            } else {
-                throw KobaltException("Couldn't find a contributor to generateAndSave BuildConfig")
-            }
-        } else {
-            return null
-        }
-    }
+//    fun maybeGenerateBuildConfig(project: Project, context: KobaltContext) : File? {
+//        val buildConfigs = findBuildConfigs(project, this)
+//
+//        if (buildConfigs.size > 0) {
+//            val pkg = project.packageName ?: project.group
+//                    ?: throw KobaltException(
+//                    "packageName needs to be defined on the project in order to generateAndSave BuildConfig")
+//
+//            val contributor = ActorUtils.selectAffinityActor(context.pluginInfo.buildConfigContributors, project)
+//            if (contributor != null) {
+//                val code = contributor.generateBuildConfig(project, context, pkg, this, buildConfigs)
+//                val result = KFiles.makeDir(KFiles.generatedSourceDir(project, this, "buildConfig"))
+//                // Make sure the generatedSourceDirectory doesn't contain the project.directory since
+//                // that directory will be added when trying to find recursively all the sources in it
+//                generatedSourceDirectory = result.relativeTo(File(project.directory))
+//                val outputGeneratedSourceDirectory = File(result, pkg.replace('.', File.separatorChar))
+//                val outputDir = File(outputGeneratedSourceDirectory, "BuildConfig." + contributor.buildConfigSuffix)
+//                KFiles.saveFile(outputDir, code)
+//                context.logger.log(project.name, 2, "Generated ${outputDir.path}")
+//                return result
+//            } else {
+//                throw KobaltException("Couldn't find a contributor to generateAndSave BuildConfig")
+//            }
+//        } else {
+//            return null
+//        }
+//    }
 
     override fun toString() = toTask("")
 

modules/kobalt-plugin-api/src/main/kotlin/com/beust/kobalt/api/CompilerActionInfo.kt

@@ -12,5 +12,4 @@ data class CompilerActionInfo(val directory: String?,
         val outputDir: File,
         val compilerArgs: List<String>,
         val friendPaths: List<String>,
-        val forceRecompile: Boolean,
-        val compilerSeparateProcess: Boolean = false)
+        val forceRecompile: Boolean)

modules/kobalt-plugin-api/src/main/kotlin/com/beust/kobalt/api/DependencyHolder.kt

@@ -13,7 +13,6 @@ interface IDependencyHolder {
     val compileDependencies : ArrayList<IClasspathDependency>
     val optionalDependencies : ArrayList<IClasspathDependency>
     val compileProvidedDependencies : ArrayList<IClasspathDependency>
-    val compileOnlyDependencies : ArrayList<IClasspathDependency>
     val compileRuntimeDependencies : ArrayList<IClasspathDependency>
     val excludedDependencies : ArrayList<IClasspathDependency>
     val nativeDependencies : ArrayList<IClasspathDependency>
@@ -30,7 +29,6 @@ open class DependencyHolder : IDependencyHolder {
     override val compileDependencies : ArrayList<IClasspathDependency> = arrayListOf()
     override val optionalDependencies : ArrayList<IClasspathDependency> = arrayListOf()
     override val compileProvidedDependencies : ArrayList<IClasspathDependency> = arrayListOf()
-    override val compileOnlyDependencies : ArrayList<IClasspathDependency> = arrayListOf()
     override val compileRuntimeDependencies : ArrayList<IClasspathDependency> = arrayListOf()
     override val excludedDependencies : ArrayList<IClasspathDependency> = arrayListOf()
     override val nativeDependencies : ArrayList<IClasspathDependency> = arrayListOf()
@@ -39,7 +37,7 @@ open class DependencyHolder : IDependencyHolder {
 
     override fun dependencies(init: Dependencies.() -> Unit) : Dependencies {
         dependencies = Dependencies(project, compileDependencies, optionalDependencies, compileProvidedDependencies,
-                compileOnlyDependencies, compileRuntimeDependencies, excludedDependencies, nativeDependencies)
+                compileRuntimeDependencies, excludedDependencies, nativeDependencies)
         dependencies!!.init()
         return dependencies!!
     }

modules/kobalt-plugin-api/src/main/kotlin/com/beust/kobalt/api/IBuildConfigContributor.kt

@@ -5,7 +5,7 @@ import com.beust.kobalt.Variant
 /**
  * Plug-ins that can generate a BuildConfig file.
  */
-interface IBuildConfigContributor : IProjectAffinity {
+interface IBuildConfigContributor : ISimpleAffinity<Project> {
     fun generateBuildConfig(project: Project, context: KobaltContext, packageName: String, variant: Variant,
             buildConfigs: List<BuildConfig>) : String
 

modules/kobalt-plugin-api/src/main/kotlin/com/beust/kobalt/api/IBuildListener.kt

@@ -4,12 +4,8 @@ package com.beust.kobalt.api
  * Plug-ins that listen to build events.
  */
 interface IBuildListener : IListener {
-
-    class TaskEndInfo(val success: Boolean, val shortMessage: String? = null,
-            val longMessage: String? = null)
-
     fun taskStart(project: Project, context: KobaltContext, taskName: String) {}
-    fun taskEnd(project: Project, context: KobaltContext, taskName: String, info: TaskEndInfo) {}
+    fun taskEnd(project: Project, context: KobaltContext, taskName: String, success: Boolean) {}
 
     fun projectStart(project: Project, context: KobaltContext) {}
     fun projectEnd(project: Project, context: KobaltContext, status: ProjectBuildStatus) {}

modules/kobalt-plugin-api/src/main/kotlin/com/beust/kobalt/api/IDependencyManager.kt

@@ -61,7 +61,7 @@ interface IDependencyManager {
                 return excluded?.map { it.id }?.contains(dep.id) ?: false
             }
 
-            val accept = dependencies.isEmpty() || dependencies.any {
+            val accept = dependencies.any {
                 // Is this dependency excluded?
                 val isExcluded = isNodeExcluded(p0, it) || isDepExcluded(p0, project?.excludedDependencies)
 

modules/kobalt-plugin-api/src/main/kotlin/com/beust/kobalt/api/IRunnerContributor.kt

@@ -1,11 +1,10 @@
 package com.beust.kobalt.api
 
 import com.beust.kobalt.TaskResult
+import com.beust.kobalt.api.IClasspathDependency
 
 /**
  * Plugins that can run a project (task "run" or "test") should implement this interface.
- *
- * Currently not used.
  */
 interface IRunnerContributor : IContributor, IProjectAffinity {
     /**

modules/kobalt-plugin-api/src/main/kotlin/com/beust/kobalt/api/ITaskContributor.kt

@@ -23,10 +23,9 @@ class DynamicTask(override val plugin: IPlugin, override val name: String, overr
 
     override fun call(): TaskResult2<ITask> {
         val taskResult = closure.invoke(project)
-        return TaskResult2(taskResult.success, errorMessage = taskResult.errorMessage, value = this)
+        return TaskResult2(taskResult.success, taskResult.errorMessage, this)
     }
 
-    override fun toString() =
-        "[DynamicTask ${project.name}:$name dependsOn=$dependsOn reverseDependsOn=$reverseDependsOn]"
+    override fun toString() = "[DynamicTask $name dependsOn=$dependsOn reverseDependsOn=$reverseDependsOn]"
 }
 

modules/kobalt-plugin-api/src/main/kotlin/com/beust/kobalt/api/Kobalt.kt

@@ -5,7 +5,6 @@ import com.beust.kobalt.HostConfig
 import com.beust.kobalt.Plugins
 import com.beust.kobalt.internal.PluginInfo
 import com.beust.kobalt.maven.DependencyManager
-import com.beust.kobalt.maven.aether.KobaltMavenResolver
 import com.google.inject.Guice
 import com.google.inject.Injector
 import com.google.inject.Module
@@ -56,9 +55,6 @@ class Kobalt {
                 // Repos from the build file
                 result.addAll(reposFromBuildFiles)
 
-                result.forEach {
-                    KobaltMavenResolver.initAuthentication(it)
-                }
                 return result.toHashSet()
             }
 
@@ -135,7 +131,6 @@ class Kobalt {
 
         fun cleanUp() {
             buildSourceDirs.clear()
-            buildFileClasspath.clear()
         }
     }
 }

modules/kobalt-plugin-api/src/main/kotlin/com/beust/kobalt/api/Project.kt

@@ -91,8 +91,7 @@ open class Project(
     @Directive
     fun dependenciesTest(init: Dependencies.() -> Unit) : Dependencies {
         dependencies = Dependencies(this, testDependencies, arrayListOf(),
-                testProvidedDependencies, compileOnlyDependencies, compileRuntimeDependencies,
-                excludedDependencies, nativeDependencies)
+                testProvidedDependencies, compileRuntimeDependencies, excludedDependencies, nativeDependencies)
         dependencies!!.init()
         return dependencies!!
     }
@@ -129,18 +128,6 @@ open class Project(
         return result
     }
 
-    class Dep(val file: File, val id: String)
-
-    /**
-     * @return a list of the transitive dependencies (absolute paths to jar files) for the given dependencies.
-     * Can be used for example as `collect(compileDependencies)`.
-     */
-    @Directive
-    fun collect(dependencies: List<IClasspathDependency>) : List<Dep> {
-        return (Kobalt.context?.dependencyManager?.transitiveClosure(dependencies) ?: emptyList())
-            .map { Dep(it.jarFile.get(), it.id) }
-    }
-
     override fun toString() = "[Project $name]"
 }
 
@@ -155,7 +142,6 @@ class Dependencies(val project: Project,
         val dependencies: ArrayList<IClasspathDependency>,
         val optionalDependencies: ArrayList<IClasspathDependency>,
         val providedDependencies: ArrayList<IClasspathDependency>,
-        val compileOnlyDependencies: ArrayList<IClasspathDependency>,
         val runtimeDependencies: ArrayList<IClasspathDependency>,
         val excludedDependencies: ArrayList<IClasspathDependency>,
         val nativeDependencies: ArrayList<IClasspathDependency>) {
@@ -246,9 +232,6 @@ class Dependencies(val project: Project,
         addToDependencies(project, dependencies, arrayOf(dep), excludeConfig = excludeConfig)
     }
 
-    @Directive
-    fun compileOnly(vararg dep: String) = addToDependencies(project, compileOnlyDependencies, dep)
-
     @Directive
     fun compileOptional(vararg dep: String) {
         addToDependencies(project, optionalDependencies, dep, optional = true)
@@ -258,6 +241,7 @@ class Dependencies(val project: Project,
     @Directive
     fun provided(vararg dep: String) {
         addToDependencies(project, providedDependencies, dep)
+        addToDependencies(project, dependencies, dep)
     }
 
     @Directive

modules/kobalt-plugin-api/src/main/kotlin/com/beust/kobalt/api/TaskContributor.kt

@@ -44,25 +44,6 @@ class TaskContributor @Inject constructor(val incrementalManagerFactory: Increme
         }
     }
 
-    fun addTask(plugin: IPlugin, project: Project, taskName: String, description: String,
-            group: String = AnnotationDefault.GROUP,
-            dependsOn: List<String> = emptyList(),
-            reverseDependsOn : List<String> = emptyList(),
-            runBefore : List<String> = emptyList(),
-            runAfter : List<String> = emptyList(),
-            alwaysRunAfter: List<String> = emptyList(),
-            runTask: (Project) -> TaskResult) {
-        dynamicTasks.add(DynamicTask(plugin, taskName, description, group, project,
-                dependsOn = dependsOn,
-                reverseDependsOn = reverseDependsOn,
-                runBefore = runBefore,
-                runAfter = runAfter,
-                alwaysRunAfter = alwaysRunAfter,
-                closure = { p: Project ->
-                    runTask(project)
-                }))
-    }
-
     fun addIncrementalVariantTasks(plugin: IPlugin, project: Project, context: KobaltContext, taskName: String,
             group: String = AnnotationDefault.GROUP,
             dependsOn: List<String> = emptyList(),

modules/kobalt-plugin-api/src/main/kotlin/com/beust/kobalt/archive/Archives.kt

@@ -1,14 +1,16 @@
 package com.beust.kobalt.archive
 
-import com.beust.kobalt.*
+import com.beust.kobalt.Features
+import com.beust.kobalt.IFileSpec
 import com.beust.kobalt.api.KobaltContext
 import com.beust.kobalt.api.Project
 import com.beust.kobalt.api.annotation.ExportedProjectProperty
-import com.beust.kobalt.misc.JarUtils
-import com.beust.kobalt.misc.KFiles
-import com.beust.kobalt.misc.kobaltLog
+import com.beust.kobalt.misc.*
 import java.io.File
+import java.io.FileOutputStream
+import java.io.OutputStream
 import java.util.*
+import java.util.zip.ZipOutputStream
 
 class Archives {
     companion object {
@@ -17,8 +19,9 @@ class Archives {
         @ExportedProjectProperty(doc = "The name of the a jar file with a main() method", type = "String")
         const val JAR_NAME_WITH_MAIN_CLASS = "jarNameWithMainClass"
 
-        fun defaultArchiveName(project: Project) = project.name +
-            if (project.version.isNullOrBlank()) "" else "-${project.version}"
+        private val DEFAULT_STREAM_FACTORY = { os : OutputStream -> ZipOutputStream(os) }
+
+        fun defaultArchiveName(project: Project) = project.name + "-" + project.version
 
         fun generateArchive(project: Project,
                 context: KobaltContext,
@@ -26,15 +29,15 @@ class Archives {
                 suffix: String,
                 includedFiles: List<IncludedFile>,
                 expandJarFiles : Boolean = false,
-                manifest: java.util.jar.Manifest? = null) : File {
+                outputStreamFactory: (OutputStream) -> ZipOutputStream = DEFAULT_STREAM_FACTORY) : File {
             val fullArchiveName = context.variant.archiveName(project, archiveName, suffix)
             val archiveDir = File(KFiles.libsDir(project))
             val result = File(archiveDir.path, fullArchiveName)
             context.logger.log(project.name, 3, "Creating $result")
             if (! Features.USE_TIMESTAMPS || isOutdated(project.directory, includedFiles, result)) {
                 try {
-                    MetaArchive(result, manifest).use { metaArchive ->
-                        JarUtils.addFiles(project.directory, includedFiles, metaArchive, expandJarFiles)
+                    outputStreamFactory(FileOutputStream(result)).use {
+                        JarUtils.addFiles(project.directory, includedFiles, it, expandJarFiles)
                         context.logger.log(project.name, 2, "Added ${includedFiles.size} files to $result")
                         context.logger.log(project.name, 1, "  Created $result")
                     }

modules/kobalt-plugin-api/src/main/kotlin/com/beust/kobalt/archive/MetaArchive.kt

@@ -1,125 +0,0 @@
-package com.beust.kobalt.archive
-
-import com.beust.kobalt.Glob
-import com.beust.kobalt.misc.KFiles
-import org.apache.commons.compress.archivers.ArchiveEntry
-import org.apache.commons.compress.archivers.zip.ZipArchiveEntry
-import org.apache.commons.compress.archivers.zip.ZipArchiveOutputStream
-import java.io.Closeable
-import java.io.File
-import java.io.FileInputStream
-import java.io.FileOutputStream
-import java.util.jar.Manifest
-import org.apache.commons.compress.archivers.zip.ZipFile as ApacheZipFile
-
-/**
- * Abstraction of a zip/jar/war archive that automatically manages the addition of expanded jar files.
- * Uses ZipArchiveOutputStream for fast inclusion of expanded jar files.
- */
-class MetaArchive(outputFile: File, val manifest: Manifest?) : Closeable {
-    companion object {
-        const val MANIFEST_MF = "META-INF/MANIFEST.MF"
-    }
-
-    private val zos= ZipArchiveOutputStream(outputFile).apply {
-        encoding = "UTF-8"
-    }
-
-    init {
-        // If no manifest was passed, create an empty one so it's the first one in the archive
-        val m = manifest ?: Manifest()
-        val manifestFile = File.createTempFile("kobalt", "tmpManifest")
-        addEntry(ZipArchiveEntry("META-INF/"), null)
-        if (manifest != null) {
-            FileOutputStream(manifestFile).use { fos ->
-                m.write(fos)
-            }
-        }
-        val entry = zos.createArchiveEntry(manifestFile, MetaArchive.MANIFEST_MF)
-        addEntry(entry, FileInputStream(manifestFile))
-    }
-
-
-    fun addFile(f: File, entryFile: File, path: String?) {
-        maybeCreateParentDirectories(f)
-        addFile2(f, entryFile, path)
-    }
-
-    private fun addFile2(f: File, entryFile: File, path: String?) {
-        val file = f.normalize()
-        FileInputStream(file).use { inputStream ->
-            val actualPath = KFiles.fixSlashes(if (path != null) path + entryFile.path else entryFile.path)
-            ZipArchiveEntry(actualPath).let { entry ->
-                maybeCreateParentDirectories(File(actualPath))
-                maybeAddEntry(entry) {
-                    addEntry(entry, inputStream)
-                }
-            }
-        }
-    }
-
-    private val createdDirs = hashSetOf<String>()
-
-    /**
-     * For an entry a/b/c/File, an entry needs to be created for each individual directory:
-     * a/
-     * a/b/
-     * a/b/c
-     * a/b/c/File
-     */
-    private fun maybeCreateParentDirectories(file: File) {
-        val toCreate = arrayListOf<String>()
-        var current = file.parentFile
-        while (current != null && current.path != ".") {
-            if (!createdDirs.contains(current.path)) {
-                toCreate.add(0, KFiles.fixSlashes(current) + "/")
-                createdDirs.add(current.path)
-            }
-            current = current.parentFile
-        }
-        toCreate.forEach { dir ->
-            addEntry(ZipArchiveEntry(dir), null)
-        }
-    }
-
-    fun addArchive(jarFile: File) {
-        ApacheZipFile(jarFile).use { jar ->
-            val jarEntries = jar.entries
-            for (entry in jarEntries) {
-                maybeAddEntry(entry) {
-                    zos.addRawArchiveEntry(entry, jar.getRawInputStream(entry))
-                }
-            }
-        }
-    }
-
-
-
-    private fun okToAdd(name: String) : Boolean {
-        val result = !KFiles.isExcluded(name,
-                Glob("META-INF/*.SF", "META-INF/*.DSA", "META-INF/*.RSA", MANIFEST_MF))
-//        if (name.startsWith("META-INF")) println((if (result) "ADDING" else "NOT ADDING") + " $name")
-        return result
-    }
-
-    override fun close() = zos.close()
-
-    private fun addEntry(entry: ArchiveEntry, inputStream: FileInputStream?) {
-        zos.putArchiveEntry(entry)
-        inputStream?.use { ins ->
-            ins.copyTo(zos, 50 * 1024)
-        }
-        zos.closeArchiveEntry()
-    }
-
-    private val seen = hashSetOf<String>()
-
-    private fun maybeAddEntry(entry: ArchiveEntry, action:() -> Unit) {
-        entry.name.let { name ->
-            if (!seen.contains(name) && okToAdd(name)) {
-                action()
-            }
-            seen.add(name)
-        }
-    }
-}

modules/kobalt-plugin-api/src/main/kotlin/com/beust/kobalt/archive/War.kt

@@ -6,7 +6,7 @@ import com.beust.kobalt.glob
 class War(override val project: Project, override var name: String = Archives.defaultArchiveName(project) + ".war")
         : Jar(project, name), AttributeHolder {
     init {
-        include(from("src/main/webapp"), to(""), glob("**"))
+        include(from("src/main/webapp"),to(""), glob("**"))
         include(from("kobaltBuild/classes"), to("WEB-INF/classes"), glob("**"))
     }
 }

modules/kobalt-plugin-api/src/main/kotlin/com/beust/kobalt/archive/Zip.kt

@@ -1,13 +1,23 @@
 package com.beust.kobalt.archive
 
-import com.beust.kobalt.*
+import com.beust.kobalt.Glob
+import com.beust.kobalt.IFileSpec
 import com.beust.kobalt.api.Project
 import com.beust.kobalt.api.annotation.Directive
+import com.beust.kobalt.misc.From
+import com.beust.kobalt.misc.IncludedFile
+import com.beust.kobalt.misc.To
 
 open class Zip(open val project: Project, open var name: String = Archives.defaultArchiveName(project) + ".zip",
-        open var fatJar: Boolean = false): AttributeHolder, IncludeFromTo()  {
+        open var fatJar: Boolean = false): AttributeHolder  {
     val excludes = arrayListOf<Glob>()
 
+    @Directive
+    fun from(s: String) = From(s)
+
+    @Directive
+    fun to(s: String) = To(s)
+
     @Directive
     fun exclude(vararg files: String) {
         files.forEach { excludes.add(Glob(it)) }
@@ -18,10 +28,34 @@ open class Zip(open val project: Project, open var name: String = Archives.defau
         specs.forEach { excludes.add(it) }
     }
 
+    @Directive
+    fun include(vararg files: String) {
+        includedFiles.add(IncludedFile(files.map { IFileSpec.FileSpec(it) }))
+    }
+
+    @Directive
+    fun include(from: From, to: To, vararg specs: String) {
+        includedFiles.add(IncludedFile(from, to, specs.map { IFileSpec.FileSpec(it) }))
+    }
+
+    @Directive
+    fun include(from: From, to: To, vararg specs: IFileSpec.GlobSpec) {
+        includedFiles.add(IncludedFile(from, to, listOf(*specs)))
+    }
+
+    /**
+     * Prefix path to be removed from the zip file. For example, if you add "build/lib/a.jar" to the zip
+     * file and the excludePrefix is "build/lib", then "a.jar" will be added at the root of the zip file.
+     */
+    val includedFiles = arrayListOf<IncludedFile>()
+
     @Directive
     open val attributes = arrayListOf(Pair("Manifest-Version", "1.0"))
 
     override fun addAttribute(k: String, v: String) {
         attributes.add(Pair(k, v))
     }
+
 }
+
+

modules/kobalt-plugin-api/src/main/kotlin/com/beust/kobalt/internal/BaseProjectRunner.kt

@@ -1,7 +1,5 @@
 package com.beust.kobalt.internal
 
-import com.beust.kobalt.TestResult
-import com.beust.kobalt.api.IBuildListener
 import com.beust.kobalt.api.KobaltContext
 import com.beust.kobalt.api.Project
 import com.beust.kobalt.api.ProjectBuildStatus
@@ -27,14 +25,9 @@ abstract class BaseProjectRunner {
         }
 
         fun runBuildListenersForTask(project: Project, context: KobaltContext, taskName: String, start: Boolean,
-                success: Boolean = false, testResult: TestResult? = null) {
+                success: Boolean = false) {
             context.pluginInfo.buildListeners.forEach {
-                if (start) {
-                    it.taskStart(project, context, taskName)
-                } else {
-                    val info = IBuildListener.TaskEndInfo(success, testResult?.shortMessage, testResult?.longMessage)
-                    it.taskEnd(project, context, taskName, info)
-                }
+                if (start) it.taskStart(project, context, taskName) else it.taskEnd(project, context, taskName, success)
             }
         }
 

modules/kobalt-plugin-api/src/main/kotlin/com/beust/kobalt/internal/BuildListeners.kt

@@ -11,8 +11,7 @@ import java.util.concurrent.ConcurrentHashMap
  */
 class BuildListeners : IBuildListener, IBuildReportContributor {
     class ProfilerInfo(val taskName: String, val durationMillis: Long)
-    class ProjectInfo(val projectName: String, var durationMillis: Long = 0,
-            var shortMessage: String? = null, var longMessage: String? = null)
+    class ProjectInfo(val projectName: String, var durationMillis: Long = 0)
 
     private val startTimes = ConcurrentHashMap<String, Long>()
     private val timings = arrayListOf<ProfilerInfo>()
@@ -30,21 +29,18 @@ class BuildListeners : IBuildListener, IBuildReportContributor {
     }
 
     // IBuildListener
-    override fun taskEnd(project: Project, context: KobaltContext, taskName: String, info: IBuildListener.TaskEndInfo) {
-        val success = info.success
+    override fun taskEnd(project: Project, context: KobaltContext, taskName: String, success: Boolean) {
         if (! success) hasFailures = true
         startTimes[taskName]?.let {
             val taskTime = System.currentTimeMillis() - it
             timings.add(ProfilerInfo(taskName, taskTime))
             projectInfos[project.name]?.let {
-                it.durationMillis += taskTime
-                if (info.shortMessage != null && it.shortMessage == null) it.shortMessage = info.shortMessage
-                if (info.longMessage != null && it.longMessage == null) it.longMessage = info.longMessage
+                it.durationMillis += taskTime.toLong()
             }
         }
     }
 
-    private val projectStatuses = arrayListOf<Pair<Project, String>>()
+    private val projectStatuses = arrayListOf<Pair<Project, ProjectBuildStatus>>()
 
     // IBuildListener
     override fun projectStart(project: Project, context: KobaltContext) {
@@ -53,9 +49,7 @@ class BuildListeners : IBuildListener, IBuildReportContributor {
 
     // IBuildListener
     override fun projectEnd(project: Project, context: KobaltContext, status: ProjectBuildStatus) {
-        val shortMessage = projectInfos[project.name]?.shortMessage
-        val statusText = status.toString() + (if (shortMessage != null) " ($shortMessage)" else "")
-        projectStatuses.add(Pair(project, statusText))
+        projectStatuses.add(Pair(project, status))
     }
 
     // IBuildReportContributor
@@ -76,15 +70,10 @@ class BuildListeners : IBuildListener, IBuildReportContributor {
 
         }
 
-        // Calculate the longest short message so we can create a column long enough to contain it
-        val width = 12 + (projectInfos.values.map { it.shortMessage?.length ?: 0 }.maxBy { it } ?: 0)
-
         fun col1(s: String) = String.format(" %1\$-30s", s)
-        fun col2(s: String) = String.format(" %1\$-${width}s", s)
+        fun col2(s: String) = String.format(" %1\$-13s", s)
         fun col3(s: String) = String.format(" %1\$-8s", s)
 
-
-
         // Only print the build report if there is more than one project and at least one of them failed
         if (timings.any()) {
 //        if (timings.size > 1 && hasFailures) {
@@ -94,7 +83,7 @@ class BuildListeners : IBuildListener, IBuildReportContributor {
             table.append(AsciiArt.logBox(listOf(line), AsciiArt.bottomLeft2, AsciiArt.bottomRight2, indent = 10) + "\n")
             projectStatuses.forEach { pair ->
                 val projectName = pair.first.name
-                val cl = listOf(col1(projectName), col2(pair.second),
+                val cl = listOf(col1(projectName), col2(pair.second.toString()),
                         col3(formatMillisLeft(projectInfos[projectName]!!.durationMillis, 8)))
                         .joinToString(AsciiArt.verticalBar)
                 table.append("          " + AsciiArt.verticalBar + " " + cl + " " + AsciiArt.verticalBar + "\n")

modules/kobalt-plugin-api/src/main/kotlin/com/beust/kobalt/internal/CompilerUtils.kt

@@ -70,12 +70,7 @@ class CompilerUtils @Inject constructor(val files: KFiles, val dependencyManager
         copyResources(project, context, SourceSet.of(isTest))
 
         val fullClasspath = dependencyManager.calculateDependencies(project, context,
-                scopes = if (isTest) {
-                    listOf(Scope.COMPILE, Scope.COMPILEONLY, Scope.TEST)
-                } else {
-                    listOf(Scope.COMPILE, Scope.COMPILEONLY)
-                })
-
+                scopes = if (isTest) listOf(Scope.COMPILE, Scope.TEST) else listOf(Scope.COMPILE))
 
         File(project.directory, buildDirectory.path).mkdirs()
 
@@ -201,7 +196,7 @@ class CompilerUtils @Inject constructor(val files: KFiles, val dependencyManager
                 .filter(File::exists)
                 .forEach {
                     context.logger.log(project.name, 2, "Copying from $it to $absOutputDir")
-                        KFiles.copyRecursively(it, absOutputDir, replaceExisting = true)
+                        KFiles.copyRecursively(it, absOutputDir, deleteFirst = false)
                 }
         } else {
             context.logger.log(project.name, 2, "No resources to copy for $sourceSet")

modules/kobalt-plugin-api/src/main/kotlin/com/beust/kobalt/internal/DocUrl.kt

@@ -2,7 +2,7 @@ package com.beust.kobalt.internal
 
 class DocUrl {
     companion object {
-        private const val HOST = "https://beust.com/kobalt/"
+        private const val HOST = "http://beust.com/kobalt/"
         private fun url(path: String) = HOST + path
 
         val PUBLISH_PLUGIN_URL = url("plug-ins/index.html#publishing")

modules/kobalt-plugin-api/src/main/kotlin/com/beust/kobalt/internal/DynamicGraph.kt

@@ -7,8 +7,7 @@ import java.lang.reflect.InvocationTargetException
 import java.util.*
 import java.util.concurrent.*
 
-open class TaskResult2<T>(success: Boolean, testResult: TestResult? = null,
-        errorMessage: String? = null, val value: T) : TaskResult(success, testResult, errorMessage) {
+open class TaskResult2<T>(success: Boolean, errorMessage: String?, val value: T) : TaskResult(success, errorMessage) {
     override fun toString() = com.beust.kobalt.misc.toString("TaskResult", "value", value, "success", success)
 }
 
@@ -394,7 +393,7 @@ fun main(argv: Array<String>) {
                 object: IWorker<String> {
                     override fun call(): TaskResult2<String>? {
                         kobaltLog(1, "  Running worker $it")
-                        return TaskResult2(true, value = it)
+                        return TaskResult2(true, null, it)
                     }
 
                     override val priority: Int get() = 0

modules/kobalt-plugin-api/src/main/kotlin/com/beust/kobalt/internal/GenericRunner.kt

@@ -4,7 +4,6 @@ import com.beust.kobalt.*
 import com.beust.kobalt.api.*
 import com.beust.kobalt.misc.KFiles
 import com.google.common.annotations.VisibleForTesting
-import com.google.inject.Inject
 import java.io.File
 import java.util.*
 
@@ -16,27 +15,14 @@ abstract class GenericTestRunner: ITestRunnerContributor {
     abstract val dependencyName : String
     abstract val mainClass: String
     abstract val annotationPackage: String
-    abstract val runnerName: String
-    open var shortMessage: String? = null
-    open var longMessage: String? = null
-
-    @Inject
-    private lateinit var jvm: Jvm
-
     abstract fun args(project: Project, context: KobaltContext, classpath: List<IClasspathDependency>,
             testConfig: TestConfig) : List<String>
 
-    open fun onFinish(project: Project) {}
-
-    open val extraClasspath: List<String> = emptyList()
-
-    open fun filterTestClasses(project: Project, context: KobaltContext, classes: List<String>) : List<String> = classes
+    open fun filterTestClasses(classes: List<String>) : List<String> = classes
 
     override fun run(project: Project, context: KobaltContext, configName: String,
-            classpath: List<IClasspathDependency>) : TaskResult {
-        val tr = runTests(project, context, classpath, configName)
-        return TaskResult(tr.success, testResult = tr)
-    }
+            classpath: List<IClasspathDependency>)
+        = TaskResult(runTests(project, context, classpath, configName))
 
     override fun affinity(project: Project, context: KobaltContext) : Int {
         val result =
@@ -69,7 +55,7 @@ abstract class GenericTestRunner: ITestRunnerContributor {
 //            }
 
         context.logger.log(project.name, 2, "Found ${result.size} test classes")
-        return filterTestClasses(project, context, result.map { it.second })
+        return filterTestClasses(result.map { it.second })
     }
 
     /**
@@ -109,19 +95,18 @@ abstract class GenericTestRunner: ITestRunnerContributor {
      * @return true if all the tests passed
      */
     open fun runTests(project: Project, context: KobaltContext, classpath: List<IClasspathDependency>,
-            configName: String) : TestResult {
+            configName: String) : Boolean {
         var result = false
 
-        context.logger.log(project.name, 1, "Running tests with $runnerName")
+        context.logger.log(project.name, 1, "Running default TestNG runner")
 
         val testConfig = project.testConfigs.firstOrNull { it.name == configName }
 
-        var errorCode = -1
         if (testConfig != null) {
             val args = args(project, context, classpath, testConfig)
             if (args.size > 0) {
 
-                val java = jvm.javaExecutable
+                val java = JavaInfo.create(File(SystemProperties.javaBase)).javaExecutable
                 val jvmArgs = calculateAllJvmArgs(project, context, testConfig, classpath,
                         Kobalt.INJECTOR.getInstance (PluginInfo::class.java))
                 val allArgs = arrayListOf<String>().apply {
@@ -137,7 +122,12 @@ abstract class GenericTestRunner: ITestRunnerContributor {
                 context.logger.log(project.name, 2, "Running tests with classpath size ${classpath.size}")
                 context.logger.log(project.name, 2, "Launching " + allArgs.joinToString(" "))
                 val process = pb.start()
-                errorCode = process.waitFor()
+                val errorCode = process.waitFor()
+                if (errorCode == 0) {
+                    context.logger.log(project.name, 1, "All tests passed")
+                } else {
+                    context.logger.log(project.name, 1, "Test failures")
+                }
                 result = result || errorCode == 0
             } else {
                 context.logger.log(project.name, 1, "  No tests to run")
@@ -146,16 +136,7 @@ abstract class GenericTestRunner: ITestRunnerContributor {
         } else {
             throw KobaltException("Couldn't find a test configuration named \"$configName\"")
         }
-
-        onFinish(project)
-
-        if (errorCode == 0) {
-            context.logger.log(project.name, 1, "All tests passed")
-        } else {
-            context.logger.log(project.name, 1, longMessage!!)
-        }
-
-        return TestResult(result, shortMessage, longMessage)
+        return result
     }
 
     /*
@@ -163,14 +144,13 @@ abstract class GenericTestRunner: ITestRunnerContributor {
      */
     @VisibleForTesting
     fun calculateAllJvmArgs(project: Project, context: KobaltContext,
-            testConfig: TestConfig, classpath: List<IClasspathDependency>, pluginInfo: IPluginInfo) : List<String> {
-        val fullClasspath = classpath.map { it.jarFile.get().absolutePath } + extraClasspath
+                            testConfig: TestConfig, classpath: List<IClasspathDependency>, pluginInfo: IPluginInfo) : List<String> {
         // Default JVM args
         val jvmFlags = arrayListOf<String>().apply {
             addAll(testConfig.jvmArgs)
             add("-ea")
             add("-classpath")
-            add(fullClasspath.joinToString(File.pathSeparator))
+            add(classpath.map { it.jarFile.get().absolutePath }.joinToString(File.pathSeparator))
         }
 
         // JVM flags from the contributors

modules/kobalt-plugin-api/src/main/kotlin/com/beust/kobalt/internal/JUnit5Runner.kt

@@ -1,152 +0,0 @@
-package com.beust.kobalt.internal
-
-import com.beust.jcommander.JCommander
-import com.beust.jcommander.Parameter
-import com.beust.kobalt.TestConfig
-import com.beust.kobalt.api.IAffinity
-import com.beust.kobalt.api.IClasspathDependency
-import com.beust.kobalt.api.KobaltContext
-import com.beust.kobalt.api.Project
-import com.beust.kobalt.misc.KFiles
-import com.beust.kobalt.misc.KobaltLogger
-import com.google.inject.Inject
-import org.junit.platform.engine.TestExecutionResult
-import org.junit.platform.engine.discovery.DiscoverySelectors
-import org.junit.platform.engine.reporting.ReportEntry
-import org.junit.platform.engine.support.descriptor.MethodSource
-import org.junit.platform.launcher.LauncherDiscoveryRequest
-import org.junit.platform.launcher.TestExecutionListener
-import org.junit.platform.launcher.TestIdentifier
-import org.junit.platform.launcher.TestPlan
-import org.junit.platform.launcher.core.LauncherDiscoveryRequestBuilder
-import org.junit.platform.launcher.core.LauncherFactory
-import java.io.File
-import java.nio.file.Paths
-
-/**
- * Runner for JUnit 5 tests. This class also contains a main() entry point since JUnit 5 no longer supplies one.
- */
-class JUnit5Runner @Inject constructor(kFiles: KFiles) : GenericTestRunner() {
-
-    override val dependencyName = "jupiter"
-    override val annotationPackage = "org.junit.jupiter.api"
-    override val mainClass = "com.beust.kobalt.internal.JUnit5RunnerKt"
-    override val runnerName = "JUnit 5"
-
-    override fun affinity(project: Project, context: KobaltContext) : Int {
-        val result =
-                if (project.testDependencies.any { it.id.contains("junit5") || it.id.contains("jupiter") })
-                    IAffinity.DEFAULT_POSITIVE_AFFINITY + 100
-                else 0
-        return result
-
-    }
-
-    override fun args(project: Project, context: KobaltContext, classpath: List<IClasspathDependency>, testConfig: TestConfig): List<String> {
-        val testClassDir = KFiles.joinDir(project.buildDirectory, KFiles.TEST_CLASSES_DIR)
-        val classDir = KFiles.joinDir(project.buildDirectory, KFiles.CLASSES_DIR)
-        val args = listOf("--testClassDir", testClassDir,
-                "--classDir", classDir,
-                "--log", KobaltLogger.LOG_LEVEL.toString())
-        return args
-    }
-
-    override val extraClasspath = kFiles.kobaltJar
-}
-
-private class Args {
-    @Parameter(names = arrayOf("--log"))
-    var log: Int = 1
-
-    @Parameter(names = arrayOf("--testClassDir"))
-    var testClassDir: String = "kobaltBuild/test-classes"
-
-    @Parameter(names = arrayOf("--classDir"))
-    var classDir: String = "kobaltBuild/classes"
-}
-
-fun main(argv: Array<String>) {
-    val args = Args()
-    val jc = JCommander(args)
-    jc.parse(*argv)
-
-    val testClassDir = File(args.testClassDir).absolutePath
-    val classDir = File(args.classDir).absolutePath
-    val request : LauncherDiscoveryRequest = LauncherDiscoveryRequestBuilder()
-            .selectors(DiscoverySelectors.selectClasspathRoots(setOf(
-                    Paths.get(testClassDir),
-                    Paths.get(classDir)
-            )))
-            .selectors(DiscoverySelectors.selectDirectory(testClassDir))
-            .build()
-
-    fun testName(id: TestIdentifier) : String? {
-        val result =
-                if (id.source.isPresent) {
-                    val source = id.source.get()
-                    if (source is MethodSource) {
-                        source.className + "." + source.methodName
-                    } else {
-                        null
-                    }
-                } else {
-                    null
-                }
-        return result
-    }
-
-    var passed = 0
-    var failed = 0
-    var skipped = 0
-    var aborted = 0
-
-    fun log(level: Int, s: String) {
-        if (level <= args.log) println(s)
-    }
-
-    val listener = object: TestExecutionListener {
-        override fun executionFinished(testIdentifier: TestIdentifier, testExecutionResult: TestExecutionResult) {
-            val testName = testName(testIdentifier)
-            if (testName != null) {
-                when(testExecutionResult.status) {
-                    TestExecutionResult.Status.FAILED -> {
-                        log(1, "FAILED: $testName, reason: " + testExecutionResult.throwable.get().toString())
-                        failed++
-                    }
-                    TestExecutionResult.Status.ABORTED -> {
-                        log(1, "ABORTED: $testName, reason: " + testExecutionResult.throwable.get().toString())
-                        aborted++
-                    }
-                    TestExecutionResult.Status.SUCCESSFUL -> {
-                        log(2, "PASSED: $testName")
-                        passed++
-                    } else -> {
-
-                    }
-                }
-            }
-        }
-
-        override fun executionSkipped(testIdentifier: TestIdentifier, reason: String) {
-            testName(testIdentifier)?.let {
-                log(1, "Skipping $it because $reason")
-                skipped++
-            }
-        }
-
-        override fun executionStarted(testIdentifier: TestIdentifier) {
-            testName(testIdentifier)?.let {
-                log(2, "Starting $it")
-            }
-        }
-
-        override fun testPlanExecutionStarted(testPlan: TestPlan?) {}
-        override fun dynamicTestRegistered(testIdentifier: TestIdentifier?) {}
-        override fun reportingEntryPublished(testIdentifier: TestIdentifier?, entry: ReportEntry?) {}
-        override fun testPlanExecutionFinished(testPlan: TestPlan?) {}
-    }
-
-    LauncherFactory.create().execute(request, listener)
-
-    log(1, "TEST RESULTS: $passed PASSED, $failed FAILED, $skipped SKIPPED, $aborted ABORTED")
-}

modules/kobalt-plugin-api/src/main/kotlin/com/beust/kobalt/internal/JUnitRunner.kt

@@ -4,29 +4,16 @@ import com.beust.kobalt.TestConfig
 import com.beust.kobalt.api.IClasspathDependency
 import com.beust.kobalt.api.KobaltContext
 import com.beust.kobalt.api.Project
-import com.beust.kobalt.maven.DependencyManager
-import com.google.inject.Inject
-import java.lang.reflect.Modifier
-import java.net.URLClassLoader
 
 open class JUnitRunner() : GenericTestRunner() {
 
     override val mainClass = "org.junit.runner.JUnitCore"
+
     override val annotationPackage = "org.junit"
+
     override val dependencyName = "junit"
-    override val runnerName = "JUnit 4"
 
     override fun args(project: Project, context: KobaltContext, classpath: List<IClasspathDependency>,
             testConfig: TestConfig) = findTestClasses(project, context, testConfig)
-
-    @Inject
-    lateinit var dependencyManager: DependencyManager
-
-    override fun filterTestClasses(project: Project, context: KobaltContext, classes: List<String>) : List<String> {
-        val deps = dependencyManager.testDependencies(project, context)
-        val cl = URLClassLoader(deps.map { it.jarFile.get().toURI().toURL() }.toTypedArray())
-        return classes.filter { !Modifier.isAbstract(cl.loadClass(it).modifiers) }
-    }
-
 }
 

modules/kobalt-plugin-api/src/main/kotlin/com/beust/kobalt/internal/JvmCompiler.kt

@@ -28,6 +28,7 @@ class JvmCompiler @Inject constructor(val dependencyManager: DependencyManager)
             .distinct()
 
         // Plugins that add flags to the compiler
+        val currentFlags = arrayListOf<String>().apply { addAll(info.compilerArgs) }
         val contributorFlags : List<String> = if (project != null) flags else emptyList()
 
         val addedFlags = contributorFlags + ArrayList(info.compilerArgs)

modules/kobalt-plugin-api/src/main/kotlin/com/beust/kobalt/internal/JvmCompilerPlugin.kt

@@ -9,6 +9,7 @@ import com.beust.kobalt.api.annotation.ExportedProjectProperty
 import com.beust.kobalt.api.annotation.IncrementalTask
 import com.beust.kobalt.api.annotation.Task
 import com.beust.kobalt.maven.DependencyManager
+import com.beust.kobalt.maven.LocalRepo
 import com.beust.kobalt.maven.Md5
 import com.beust.kobalt.maven.aether.Scope
 import com.beust.kobalt.misc.KFiles
@@ -26,6 +27,7 @@ import javax.inject.Singleton
  */
 @Singleton
 open class JvmCompilerPlugin @Inject constructor(
+        open val localRepo: LocalRepo,
         open val files: KFiles,
         open val dependencyManager: DependencyManager,
         open val executors: KobaltExecutors,
@@ -89,7 +91,7 @@ open class JvmCompilerPlugin @Inject constructor(
                     dependencyFilter = dependencyManager.createDependencyFilter(project, project.testDependencies),
                     scopes = listOf(Scope.TEST))
             val compileDependencies = dependencyManager.calculateDependencies(project, context,
-                    scopes = listOf(Scope.COMPILE, Scope.COMPILEONLY))
+                    scopes = listOf(Scope.COMPILE))
             val allDependencies = (testDependencies + compileDependencies).distinct()
             return testContributor.run(project, context, configName, allDependencies.toList())
         } else {
@@ -157,10 +159,6 @@ open class JvmCompilerPlugin @Inject constructor(
         if (compilerContributors.isEmpty()) {
             throw KobaltException("Couldn't find any compiler for project ${project.name}")
         } else {
-
-            // Generate BuildConfig if applicable
-            context.variant.maybeGenerateBuildConfig(project, context)
-
             val allCompilers = compilerContributors.flatMap { it.compilersFor(project, context)}.sorted()
 
             /**
@@ -174,10 +172,7 @@ open class JvmCompilerPlugin @Inject constructor(
                     if (wi.value.sourceSuffixes.contains("java")) ij = wi.index
                     if (wi.value.sourceSuffixes.contains("kt")) ik = wi.index
                 }
-
-                if (ik >= 0 && ij >= 0) {
-                    Collections.swap(result, ik, ij)
-                }
+                Collections.swap(result, ik, ij)
                 return result
             }
 
@@ -187,8 +182,8 @@ open class JvmCompilerPlugin @Inject constructor(
             var done = false
             // The directory where the classes get compiled
             val buildDirectory =
-                    if (isTest) File(KFiles.joinDir(project.buildDirectory, KFiles.TEST_CLASSES_DIR))
-                    else File(KFiles.joinDir(project.classesDir(context)))
+                    if (isTest) File(project.buildDirectory, KFiles.TEST_CLASSES_DIR)
+                    else File(project.classesDir(context))
 
             allCompilersSorted.doWhile({ ! done }) { compiler ->
                 val compilerResults = compilerUtils.invokeCompiler(project, context, compiler,
@@ -226,7 +221,7 @@ open class JvmCompilerPlugin @Inject constructor(
     }
 
     @Task(name = "doc", description = "Generate the documentation for the project", group = GROUP_DOCUMENTATION,
-            runBefore = arrayOf("assemble"), runAfter = arrayOf("clean"))
+            runBefore = arrayOf("assemble"))
     fun taskJavadoc(project: Project): TaskResult {
         val docGenerator = ActorUtils.selectAffinityActor(project, context, context.pluginInfo.docContributors)
         if (docGenerator != null) {

modules/kobalt-plugin-api/src/main/kotlin/com/beust/kobalt/internal/KobaltPluginXml.kt

@@ -78,7 +78,7 @@ class PluginInfo(val xml: KobaltPluginXml, val pluginClassLoader: ClassLoader?,
     val compilerInterceptors = arrayListOf<ICompilerInterceptor>()
     val sourceDirectoriesInterceptors = arrayListOf<ISourceDirectoryInterceptor>()
     val buildDirectoryInterceptors = arrayListOf<IBuildDirectoryInterceptor>()
-//    val runnerContributors = arrayListOf<IRunnerContributor>()
+    val runnerContributors = arrayListOf<IRunnerContributor>()
     val testRunnerContributors = arrayListOf<ITestRunnerContributor>()
     val classpathInterceptors = arrayListOf<IClasspathInterceptor>()
     val compilerContributors = arrayListOf<ICompilerContributor>()
@@ -197,7 +197,7 @@ class PluginInfo(val xml: KobaltPluginXml, val pluginClassLoader: ClassLoader?,
                 if (this is IPlugin) plugins.add(this)
                 if (this is IProjectContributor) projectContributors.add(this)
                 if (this is IRepoContributor) repoContributors.add(this)
-//                if (this is IRunnerContributor) runnerContributors.add(this)
+                if (this is IRunnerContributor) runnerContributors.add(this)
                 if (this is ISourceDirectoryContributor) sourceDirContributors.add(this)
                 if (this is ISourceDirectoryInterceptor) sourceDirectoriesInterceptors.add(this)
                 if (this is ITaskContributor) taskContributors.add(this)
@@ -225,7 +225,7 @@ class PluginInfo(val xml: KobaltPluginXml, val pluginClassLoader: ClassLoader?,
         listOf(projectContributors, classpathContributors, templateContributors,
                 repoContributors, compilerFlagContributors, compilerInterceptors,
                 sourceDirectoriesInterceptors, buildDirectoryInterceptors,
-                /* runnerContributors, */ testRunnerContributors, classpathInterceptors,
+                runnerContributors, testRunnerContributors, classpathInterceptors,
                 compilerContributors, docContributors, sourceDirContributors,
                 testSourceDirContributors, buildConfigFieldContributors,
                 taskContributors, incrementalTaskContributors, assemblyContributors,
@@ -252,7 +252,7 @@ class PluginInfo(val xml: KobaltPluginXml, val pluginClassLoader: ClassLoader?,
         compilerInterceptors.addAll(pluginInfo.compilerInterceptors)
         sourceDirectoriesInterceptors.addAll(pluginInfo.sourceDirectoriesInterceptors)
         buildDirectoryInterceptors.addAll(pluginInfo.buildDirectoryInterceptors)
-//        runnerContributors.addAll(pluginInfo.runnerContributors)
+        runnerContributors.addAll(pluginInfo.runnerContributors)
         testRunnerContributors.addAll(pluginInfo.testRunnerContributors)
         classpathInterceptors.addAll(pluginInfo.classpathInterceptors)
         compilerContributors.addAll(pluginInfo.compilerContributors)

modules/kobalt-plugin-api/src/main/kotlin/com/beust/kobalt/internal/KobaltSettingsXml.kt

@@ -25,7 +25,7 @@ class KobaltSettingsXml {
     @XmlElement(name = "localMavenRepo") @JvmField
     var localMavenRepo: String = homeDir(KFiles.KOBALT_DOT_DIR, "localMavenRepo")
 
-    @XmlElement(name = "defaultRepos") @JvmField
+    @XmlElement(name = "defaulRepos") @JvmField
     var defaultRepos: DefaultReposXml? = null
 
     @XmlElement(name = "proxies") @JvmField

modules/kobalt-plugin-api/src/main/kotlin/com/beust/kobalt/internal/KotlinJarFiles.kt

@@ -16,5 +16,6 @@ class KotlinJarFiles @Inject constructor(val dependencyManager: DependencyManage
     }
 
     val stdlib: File get() = getKotlinCompilerJar("stdlib")
+    val runtime: File get() = getKotlinCompilerJar("runtime")
     val compiler: File get() = getKotlinCompilerJar("compiler-embeddable")
 }

modules/kobalt-plugin-api/src/main/kotlin/com/beust/kobalt/internal/KotlinTestRunner.kt

@@ -1,21 +1,16 @@
 package com.beust.kobalt.internal
 
-import com.beust.kobalt.api.KobaltContext
-import com.beust.kobalt.api.Project
-
 /**
  * KotlinTestRunner triggers if it finds a dependency on io.kotlintest but other than that, it just
  * uses the regular JUnitRunner.
  */
 class KotlinTestRunner : JUnitRunner() {
     override val dependencyName = "io.kotlintest"
-    override val runnerName = "Kotlin Test"
 
     /**
      * KotlinTestRunner runs tests in the init{} initializer, so ignore all the extra
      * classes generated by the Kotlin compiler.
      */
-    override fun filterTestClasses(projet: Project, context: KobaltContext, classes: List<String>)
-            = classes.filter { !it.contains("$") }
+    override fun filterTestClasses(classes: List<String>) = classes.filter { ! it.contains("$") }
 }
 

modules/kobalt-plugin-api/src/main/kotlin/com/beust/kobalt/internal/ParallelProjectRunner.kt

@@ -54,12 +54,12 @@ class ParallelProjectRunner(val tasksByNames: (Project) -> ListMultimap<String,
                             runBuildListenersForTask(project, context, task.name, start = true)
                             logger.log(project.name, 1,
                                     AsciiArt.taskColor(AsciiArt.horizontalSingleLine + " ${project.name}:${task.name}"))
-                            val thisResult = if (dryRun) TaskResult2(true, value = task) else task.call()
+                            val thisResult = if (dryRun) TaskResult2(true, null, task) else task.call()
                             if (lastResult.success) {
                                 lastResult = thisResult
                             }
                             runBuildListenersForTask(project, context, task.name, start = false,
-                                    success = thisResult.success, testResult = thisResult.testResult)
+                                    success = thisResult.success)
                         }
                     }
                     graph.freeNodes.forEach { graph.removeNode(it) }
@@ -69,7 +69,7 @@ class ParallelProjectRunner(val tasksByNames: (Project) -> ListMultimap<String,
                 runBuildListenersForProject(project, context, false,
                         if (lastResult.success) ProjectBuildStatus.SUCCESS else ProjectBuildStatus.FAILED)
 
-                return TaskResult2(lastResult.success, errorMessage = lastResult.errorMessage, value = this)
+                return TaskResult2(lastResult.success, lastResult.errorMessage, this)
             }
 
         }

modules/kobalt-plugin-api/src/main/kotlin/com/beust/kobalt/internal/SpekRunner.kt

@@ -6,6 +6,5 @@ package com.beust.kobalt.internal
  */
 class SpekRunner : JUnitRunner() {
     override val dependencyName = "org.jetbrains.spek"
-    override val runnerName = "Spek"
 }
 

modules/kobalt-plugin-api/src/main/kotlin/com/beust/kobalt/internal/TaskManager.kt

@@ -17,7 +17,7 @@ import javax.inject.Singleton
 @Singleton
 class TaskManager @Inject constructor(val args: Args,
         val incrementalManagerFactory: IncrementalManager.IFactory,
-        val kobaltLog: ParallelLogger) {
+        val pluginInfo: PluginInfo, val kobaltLog: ParallelLogger) {
     private val dependsOn = TreeMultimap.create<String, String>()
     private val reverseDependsOn = TreeMultimap.create<String, String>()
     private val runBefore = TreeMultimap.create<String, String>()
@@ -80,9 +80,6 @@ class TaskManager @Inject constructor(val args: Args,
         }
     }
 
-//    @Inject
-//    lateinit var pluginInfo: PluginInfo
-
     fun runTargets(passedTaskNames: List<String>, allProjects: List<Project>): RunTargetResult {
         // Check whether tasks passed at command line exist
         passedTaskNames.forEach {
@@ -90,7 +87,6 @@ class TaskManager @Inject constructor(val args: Args,
                 throw KobaltException("Unknown task: $it")
         }
 
-        val pluginInfo = Kobalt.INJECTOR.getInstance(PluginInfo::class.java)
         var taskInfos = calculateDependentTaskNames(passedTaskNames, allProjects)
 
         // Remove non existing tasks (e.g. dynamic task defined for a single project)
@@ -272,8 +268,7 @@ class TaskManager @Inject constructor(val args: Args,
                 object : BasePluginTask(plugin, name, description, group, project) {
                     override fun call(): TaskResult2<ITask> {
                         val taskResult = task(project)
-                        return TaskResult2(taskResult.success, errorMessage = taskResult.errorMessage, value = this,
-                            testResult = taskResult.testResult)
+                        return TaskResult2(taskResult.success, taskResult.errorMessage, this)
                     }
                 })
         dependsOn.forEach { dependsOn(it, name) }
@@ -320,11 +315,9 @@ class TaskWorker(val tasks: List<ITask>, val dryRun: Boolean, val pluginInfo: Pl
             val tr = if (dryRun) TaskResult() else it.call()
             BaseProjectRunner.runBuildListenersForTask(it.project, context, name, start = false, success = tr.success)
             success = success and tr.success
-            tr.errorMessage?.let {
-                errorMessages.add(it)
-            }
+            if (tr.errorMessage != null) errorMessages.add(tr.errorMessage)
         }
-        return TaskResult2(success, errorMessage = errorMessages.joinToString("\n"), value = tasks[0])
+        return TaskResult2(success, errorMessages.joinToString("\n"), tasks[0])
     }
 
 //    override val timeOut : Long = 10000

modules/kobalt-plugin-api/src/main/kotlin/com/beust/kobalt/internal/TestNgRunner.kt

@@ -2,38 +2,23 @@ package com.beust.kobalt.internal
 
 import com.beust.kobalt.AsciiArt
 import com.beust.kobalt.TestConfig
-import com.beust.kobalt.TestResult
-import com.beust.kobalt.api.IClasspathDependency
-import com.beust.kobalt.api.KobaltContext
-import com.beust.kobalt.api.Project
+import com.beust.kobalt.api.*
 import com.beust.kobalt.maven.aether.AetherDependency
 import com.beust.kobalt.misc.*
 import org.testng.remote.RemoteArgs
-import org.testng.remote.strprotocol.JsonMessageSender
-import org.testng.remote.strprotocol.MessageHelper
-import org.testng.remote.strprotocol.MessageHub
-import org.testng.remote.strprotocol.TestResultMessage
-import org.w3c.dom.Attr
-import org.w3c.dom.NodeList
-import org.xml.sax.InputSource
+import org.testng.remote.strprotocol.*
 import java.io.File
-import java.io.FileReader
 import java.io.IOException
-import javax.xml.parsers.DocumentBuilderFactory
-import javax.xml.xpath.XPathConstants
-import javax.xml.xpath.XPathFactory
 
 class TestNgRunner : GenericTestRunner() {
 
     override val mainClass = "org.testng.TestNG"
-    override val dependencyName = "testng"
-    override val annotationPackage = "org.testng"
-    override val runnerName = "TestNG"
 
-    private fun defaultOutputWithoutProjectDir(project: Project)
-            = KFiles.joinDir(project.buildDirectory, "test-output")
-    private fun defaultOutput(project: Project)
-            = KFiles.joinDir(project.directory, project.buildDirectory, "test-output")
+    override val dependencyName = "testng"
+
+    override val annotationPackage = "org.testng"
+
+    fun defaultOutput(project: Project) = KFiles.joinDir(project.buildDirectory, "test-output")
 
     override fun args(project: Project, context: KobaltContext, classpath: List<IClasspathDependency>,
             testConfig: TestConfig) = arrayListOf<String>().apply {
@@ -45,9 +30,7 @@ class TestNgRunner : GenericTestRunner() {
 
         if (testConfig.testArgs.none { it == "-d" }) {
             add("-d")
-            // Don't include the project directory here since the generic runner will cd to that directory before
-            // running the tests
-            add(defaultOutputWithoutProjectDir(project))
+            add(defaultOutput(project))
         }
 
         if (testConfig.testArgs.size == 0) {
@@ -73,50 +56,11 @@ class TestNgRunner : GenericTestRunner() {
         }
     }
 
-    /**
-     * Extract test results from testng-results.xml and initialize shortMessage.
-     */
-    override fun onFinish(project: Project) {
-        File(defaultOutput(project), "testng-results.xml").let { file ->
-            val ins = InputSource(FileReader(file))
-            val doc = DocumentBuilderFactory.newInstance().newDocumentBuilder().parse(ins)
-
-            val root = doc.documentElement
-            var failed = 0
-            var skipped = 0
-            var passed = 0
-            val xp = XPathFactory.newInstance().newXPath()
-            val testMethods = xp.compile("/testng-results/suite/test/class/test-method[@status='FAIL']")
-                    .evaluate(doc, XPathConstants.NODESET)
-                    as NodeList
-            val failedMethods = arrayListOf<String>()
-            repeat(testMethods.length) {
-                val tm = testMethods.item(it)
-                failedMethods.add(tm.attributes.getNamedItem("signature").textContent)
-            }
-            repeat(root.attributes.length) {
-                val attribute = root.attributes.item(it)
-                if (attribute is Attr) when (attribute.name) {
-                    "failed" -> failed = Integer.parseInt(attribute.value)
-                    "skipped" -> skipped = Integer.parseInt(attribute.value)
-                    "passed" -> passed = Integer.parseInt(attribute.value)
-                }
-            }
-
-            if (failed == 0) {
-                shortMessage = "$passed tests"
-            } else if (failed > 0) {
-                shortMessage = "$failed failed" + (if (skipped > 0) ", $skipped skipped" else "") + " tests"
-                longMessage = "Failed tests:\n  " + failedMethods.joinToString("\n  ")
-            }
-        }
-    }
-
     val VERSION_6_10 = StringVersion("6.10")
 
     fun _runTests(project: Project, context: KobaltContext, classpath: List<IClasspathDependency>,
 //    override fun runTests(project: Project, context: KobaltContext, classpath: List<IClasspathDependency>,
-            configName: String): TestResult {
+            configName: String): Boolean {
 
         val testConfig = project.testConfigs.firstOrNull { it.name == configName }
 
@@ -137,7 +81,7 @@ class TestNgRunner : GenericTestRunner() {
                 }
             return result
         } else {
-            return TestResult(true)
+            return true
         }
     }
 
@@ -154,8 +98,7 @@ class TestNgRunner : GenericTestRunner() {
     }
 
     private fun displayPrettyColors(project: Project, context: KobaltContext,
-            classpath: List<IClasspathDependency>, testConfig: TestConfig, versions: Pair<String, String>)
-            : TestResult {
+            classpath: List<IClasspathDependency>, testConfig: TestConfig, versions: Pair<String, String>): Boolean {
         val port = 2345
 //        launchRemoteServer(project, context, classpath, testConfig, versions, port)
 
@@ -204,7 +147,7 @@ class TestNgRunner : GenericTestRunner() {
             val top = it.stackTrace.substring(0, it.stackTrace.indexOf("\n"))
              kobaltLog(1, "  " + it.cls + "." + it.method + "\n    " + top)
         }
-        return TestResult(failed.isEmpty() && skipped.isEmpty())
+        return failed.isEmpty() && skipped.isEmpty()
     }
 
     fun launchRemoteServer(project: Project, context: KobaltContext, classpath: List<IClasspathDependency>,

modules/kobalt-plugin-api/src/main/kotlin/com/beust/kobalt/maven/DependencyManager.kt

@@ -106,10 +106,6 @@ class DependencyManager @Inject constructor(val executors: KobaltExecutors,
             val result = arrayListOf<IClasspathDependency>().apply {
                 if (scopes.contains(Scope.COMPILE)) {
                     addAll(project.compileDependencies)
-                    addAll(project.compileProvidedDependencies)
-                }
-                if (scopes.contains(Scope.COMPILEONLY)) {
-                    addAll(project.compileOnlyDependencies)
                 }
                 if (scopes.contains(Scope.RUNTIME)) {
                     addAll(project.compileRuntimeDependencies)
@@ -179,13 +175,13 @@ class DependencyManager @Inject constructor(val executors: KobaltExecutors,
      * TODO: This should be private, everyone should be calling calculateDependencies().
      */
     fun transitiveClosure(dependencies : List<IClasspathDependency>,
-            filter: DependencyFilter = Filters.EXCLUDE_OPTIONAL_FILTER,
+            dependencyFilter: DependencyFilter? = null,
             requiredBy: String? = null): List<IClasspathDependency> {
         val result = arrayListOf<IClasspathDependency>()
         dependencies.forEach { dependency ->
             result.add(dependency)
             if (dependency.isMaven) {
-                val resolved = resolver.resolveToIds(dependency.id, null, filter).map { create(it) }
+                val resolved = resolver.resolveToIds(dependency.id, null, dependencyFilter).map { create(it) }
                 result.addAll(resolved)
             }
         }

modules/kobalt-plugin-api/src/main/kotlin/com/beust/kobalt/maven/Gpg.kt

@@ -1,18 +1,16 @@
 package com.beust.kobalt.maven
 
 import com.beust.kobalt.OperatingSystem
-import com.beust.kobalt.misc.LocalProperties
 import com.beust.kobalt.misc.error
 import com.beust.kobalt.misc.kobaltLog
 import com.beust.kobalt.misc.warn
-import com.google.inject.Inject
 import com.google.inject.Singleton
 import java.io.BufferedReader
 import java.io.File
 import java.io.InputStreamReader
 
 @Singleton
-class Gpg @Inject constructor(val localProperties: LocalProperties) {
+class Gpg {
     val COMMANDS = listOf("gpg", "gpg2")
 
      fun findGpgCommand() : String? {
@@ -44,21 +42,6 @@ class Gpg @Inject constructor(val localProperties: LocalProperties) {
                 ascFile.delete()
                 val allArgs = arrayListOf<String>()
                 allArgs.add(gpg)
-
-                fun maybeAdd(prop: String, f: (String) -> Unit) = localProperties.getNoThrows(prop)?.let {
-                    f(it)
-                }
-
-                maybeAdd("gpg.password") {
-                    allArgs.addAll(listOf("--passphrase", it, "--batch", "--yes"))
-                }
-                maybeAdd("gpg.keyId") {
-                    allArgs.addAll(listOf("--local-user", it))
-                }
-                maybeAdd("gpg.secretKeyRingFile") {
-                    allArgs.addAll(listOf("--secret-keyring", "\"$it\""))
-                }
-
                 allArgs.add("-ab")
                 allArgs.add(file.absolutePath)
 

modules/kobalt-plugin-api/src/main/kotlin/com/beust/kobalt/maven/Kurl.kt

@@ -1,8 +1,9 @@
 package com.beust.kobalt.maven
 
 import com.beust.kobalt.HostConfig
-import com.beust.kobalt.maven.aether.KobaltMavenResolver
+import com.beust.kobalt.KobaltException
 import com.beust.kobalt.maven.dependency.FileDependency
+import com.beust.kobalt.misc.LocalProperties
 import java.io.*
 import java.net.HttpURLConnection
 import java.net.URL
@@ -20,7 +21,27 @@ class Kurl(val hostInfo: HostConfig) {
     }
 
     init {
-        KobaltMavenResolver.initAuthentication(hostInfo)
+        // See if the URL needs to be authenticated. Look in local.properties for keys
+        // of the format authUrl.<host>.user=xxx and authUrl.<host>.password=xxx
+        val properties = LocalProperties().localProperties
+        val host = java.net.URL(hostInfo.url).host
+        properties.entries.forEach {
+            val key = it.key.toString()
+            if (key == "$KEY.$host.$VALUE_USER") {
+                hostInfo.username = properties.getProperty(key)
+            } else if (key == "$KEY.$host.$VALUE_PASSWORD") {
+                hostInfo.password = properties.getProperty(key)
+            }
+        }
+        fun error(s1: String, s2: String) {
+            throw KobaltException("Found \"$s1\" but not \"$s2\" in local.properties for $KEY.$host",
+                    docUrl = "http://beust.com/kobalt/documentation/index.html#maven-repos-authenticated")
+        }
+        if (! hostInfo.username.isNullOrBlank() && hostInfo.password.isNullOrBlank()) {
+            error("username", "password")
+        } else if(hostInfo.username.isNullOrBlank() && ! hostInfo.password.isNullOrBlank()) {
+            error("password", "username")
+        }
     }
 
     override fun toString() = hostInfo.toString()

modules/kobalt-plugin-api/src/main/kotlin/com/beust/kobalt/maven/aether/AetherDependency.kt

@@ -26,24 +26,33 @@ class AetherDependency(val artifact: Artifact, override val optional: Boolean =
     private fun toId(a: Artifact) = a.toString()
 
     override val jarFile: Future<File>
-        get() {
-            resolveSourcesIfNeeded()
-            return if (artifact.file != null) {
-                    CompletedFuture(artifact.file)
-                } else {
-                    val td = aether.resolve(artifact)
-                    CompletedFuture(td.root.artifact.file)
-                }
-        }
+        get() =
+            if (artifact.file != null) {
+                resolveSourcesIfNeeded()
+                CompletedFuture(artifact.file)
+            } else {
+                resolveSourcesIfNeeded()
+                val td = aether.resolve(artifact)
+                CompletedFuture(td.root.artifact.file)
+            }
 
     private fun resolveSourcesIfNeeded() {
         if (args?.downloadSources ?: false) {
-            listOf(artifact.toSourcesArtifact(), artifact.toJavaDocArtifact()).forEach { artifact ->
-                if (artifact.file == null) {
+            artifact.toSourcesArtifact().let { sourcesArtifact ->
+                if (sourcesArtifact.file == null) {
                     try {
-                        aether.resolve(artifact)
+                        aether.resolve(sourcesArtifact)
                     } catch(e: DependencyResolutionException) {
-                        // Ignore
+                        //do nothing
+                    }
+                }
+            }
+            artifact.toJavaDocArtifact().let { javadocArtifact ->
+                if (javadocArtifact.file == null) {
+                    try {
+                        aether.resolve(javadocArtifact)
+                    } catch(e: DependencyResolutionException) {
+                        //do nothing
                     }
                 }
             }

modules/kobalt-plugin-api/src/main/kotlin/com/beust/kobalt/maven/aether/Booter.kt

@@ -2,7 +2,6 @@ package com.beust.kobalt.maven.aether
 
 import com.beust.kobalt.internal.KobaltSettings
 import com.google.common.eventbus.EventBus
-import com.beust.kobalt.Args
 import org.eclipse.aether.DefaultRepositorySystemSession
 import org.eclipse.aether.RepositorySystem
 import org.eclipse.aether.repository.LocalRepository
@@ -33,9 +32,8 @@ object Booter {
 //    }
 
     fun newRepositorySystemSession(system: RepositorySystem, repo: File, settings: KobaltSettings,
-            args: Args, eventBus: EventBus): DefaultRepositorySystemSession {
+            eventBus: EventBus): DefaultRepositorySystemSession {
         val session = MavenRepositorySystemUtils.newSession(settings)
-        session.isOffline = args.offline
 
         val localRepo = LocalRepository(repo.absolutePath)
         session.localRepositoryManager = system.newLocalRepositoryManager(session, localRepo)

modules/kobalt-plugin-api/src/main/kotlin/com/beust/kobalt/maven/aether/ConsoleRepositoryListener.kt

@@ -16,6 +16,12 @@ class ConsoleRepositoryListener @JvmOverloads constructor(out: PrintStream? = nu
         val LOG_LEVEL = 4
     }
 
+    private val out: PrintStream
+
+    init {
+        this.out = out ?: System.out
+    }
+
     override fun artifactDeployed(event: RepositoryEvent?) {
         kobaltLog(LOG_LEVEL, "Deployed " + event!!.artifact + " to " + event.repository)
     }

modules/kobalt-plugin-api/src/main/kotlin/com/beust/kobalt/maven/aether/Filters.kt

@@ -1,8 +1,6 @@
 package com.beust.kobalt.maven.aether
 
-import com.beust.kobalt.misc.kobaltLog
 import org.eclipse.aether.graph.DependencyFilter
-import org.eclipse.aether.graph.DependencyNode
 import org.eclipse.aether.util.artifact.JavaScopes
 
 object Filters {
@@ -11,15 +9,7 @@ object Filters {
     }
     val TEST_FILTER = DependencyFilter { p0, p1 -> p0.dependency.scope == JavaScopes.TEST }
 
-    val EXCLUDE_OPTIONAL_FILTER = object: DependencyFilter {
-        override fun accept(p0: DependencyNode, p1: MutableList<DependencyNode>): Boolean {
-            val result = p0.dependency != null && ! p0.dependency.optional
-            if (! result) {
-                kobaltLog(3, "Excluding from optional filter: $p0")
-            }
-            return result
-        }
-
-        override fun toString() = "EXCLUDE_OPTIONAL_FILTER"
+    val EXCLUDE_OPTIONAL_FILTER = DependencyFilter { p0, p1 ->
+        p0.dependency != null && ! p0.dependency.optional
     }
 }

modules/kobalt-plugin-api/src/main/kotlin/com/beust/kobalt/maven/aether/KobaltMavenResolver.kt

@@ -2,14 +2,11 @@ package com.beust.kobalt.maven.aether
 
 import com.beust.kobalt.Args
 import com.beust.kobalt.HostConfig
-import com.beust.kobalt.KobaltException
 import com.beust.kobalt.api.Kobalt
 import com.beust.kobalt.internal.KobaltSettings
 import com.beust.kobalt.internal.getProxy
-import com.beust.kobalt.maven.Kurl
 import com.beust.kobalt.maven.LocalRepo
 import com.beust.kobalt.maven.MavenId
-import com.beust.kobalt.misc.LocalProperties
 import com.google.common.eventbus.EventBus
 import com.google.inject.Inject
 import org.eclipse.aether.artifact.Artifact
@@ -24,7 +21,6 @@ import org.eclipse.aether.resolution.DependencyRequest
 import org.eclipse.aether.resolution.DependencyResult
 import org.eclipse.aether.resolution.VersionRangeRequest
 import org.eclipse.aether.resolution.VersionRangeResult
-import org.eclipse.aether.util.repository.AuthenticationBuilder
 import java.util.*
 
 class KobaltMavenResolver @Inject constructor(val settings: KobaltSettings,
@@ -36,76 +32,29 @@ class KobaltMavenResolver @Inject constructor(val settings: KobaltSettings,
             MavenId.toId(it.groupId, it.artifactId, it.extension, it.classifier, it.version)
         }
         fun isRangeVersion(id: String) = id.contains(",")
-
-        fun initAuthentication(hostInfo: HostConfig) {
-            // See if the URL needs to be authenticated. Look in local.properties for keys
-            // of the format authUrl.<host>.user=xxx and authUrl.<host>.password=xxx
-            val properties = LocalProperties().localProperties
-            val host = java.net.URL(hostInfo.url).host
-            properties.entries.forEach {
-                val key = it.key.toString()
-                if (key == "${Kurl.KEY}.$host.${Kurl.VALUE_USER}") {
-                    hostInfo.username = properties.getProperty(key)
-                } else if (key == "${Kurl.KEY}.$host.${Kurl.VALUE_PASSWORD}") {
-                    hostInfo.password = properties.getProperty(key)
-                }
-            }
-            fun error(s1: String, s2: String) {
-                throw KobaltException("Found \"$s1\" but not \"$s2\" in local.properties for ${Kurl.KEY}.$host",
-                        docUrl = "https://beust.com/kobalt/documentation/index.html#maven-repos-authenticated")
-            }
-            if (! hostInfo.username.isNullOrBlank() && hostInfo.password.isNullOrBlank()) {
-                error("username", "password")
-            } else if(hostInfo.username.isNullOrBlank() && ! hostInfo.password.isNullOrBlank()) {
-                error("password", "username")
-            }
-
-        }
     }
 
-    fun resolveToArtifact(id: String, scope: Scope? = null,
-            filter: DependencyFilter = Filters.EXCLUDE_OPTIONAL_FILTER) : Artifact
+    fun resolveToArtifact(id: String, scope: Scope? = null, filter: DependencyFilter? = null) : Artifact
         = resolve(id, scope, filter).root.artifact
 
-    fun resolve(passedId: String, scope: Scope? = null,
-            filter: DependencyFilter = Filters.EXCLUDE_OPTIONAL_FILTER,
+    fun resolve(id: String, scope: Scope? = null, filter: DependencyFilter? = null,
             repos: List<String> = emptyList()): DependencyResult {
-        val mavenId = MavenId.toMavenId(passedId)
-        val id =
-            if (isRangeVersion(mavenId)) {
-                val artifact = DefaultArtifact(mavenId)
-                val request = VersionRangeRequest(artifact, createRepos(repos), null)
-                val rr = system.resolveVersionRange(session, request)
-                if (rr.highestVersion != null) {
-                    val newArtifact = DefaultArtifact(artifact.groupId, artifact.artifactId, artifact.classifier,
-                            artifact.extension, rr.highestVersion.toString())
-                    artifactToId(newArtifact)
-                } else {
-                    throw KobaltException("Couldn't resolve $passedId")
-                }
-            } else {
-                passedId
-            }
-
-        val collectRequest = createCollectRequest(id, scope, repos)
-        val dependencyRequest = DependencyRequest(collectRequest, filter)
+        val dependencyRequest = DependencyRequest(createCollectRequest(id, scope, repos), filter)
         val result = system.resolveDependencies(session, dependencyRequest)
-        //        GraphUtil.displayGraph(listOf(result.root), { it -> it.children },
-        //                { it: DependencyNode, indent: String -> println(indent + it.toString()) })
+//        GraphUtil.displayGraph(listOf(result.root), { it -> it.children },
+//                { it: DependencyNode, indent: String -> println(indent + it.toString()) })
         return result
     }
 
-    fun resolve(artifact: Artifact, scope: Scope? = null,
-            filter: DependencyFilter = Filters.EXCLUDE_OPTIONAL_FILTER)
+    fun resolve(artifact: Artifact, scope: Scope? = null, filter: DependencyFilter? = null)
         = resolve(artifactToId(artifact), scope, filter)
 
-    fun resolveToIds(id: String, scope: Scope? = null,
-            filter: DependencyFilter = Filters.EXCLUDE_OPTIONAL_FILTER,
+    fun resolveToIds(id: String, scope: Scope? = null, filter: DependencyFilter? = null,
             seen: HashSet<String> = hashSetOf<String>()) : List<String> {
         val rr = resolve(id, scope, filter)
         val children =
             rr.root.children.filter {
-                filter.accept(DefaultDependencyNode(it.dependency), emptyList())
+                filter == null || filter.accept(DefaultDependencyNode(it.dependency), emptyList())
             }.filter {
                 it.dependency.scope != Scope.SYSTEM.scope
             }
@@ -141,19 +90,10 @@ class KobaltMavenResolver @Inject constructor(val settings: KobaltSettings,
     fun create(id: String, optional: Boolean) = AetherDependency(DefaultArtifact(id), optional, args)
 
     private val system = Booter.newRepositorySystem()
-    private val session = Booter.newRepositorySystemSession(system, localRepo.localRepo, settings, args, eventBus)
+    private val session = Booter.newRepositorySystemSession(system, localRepo.localRepo, settings, eventBus)
 
-    private fun createRepo(hostConfig: HostConfig) : RemoteRepository {
-        val builder = RemoteRepository.Builder(hostConfig.name, "default", hostConfig.url)
-        if (hostConfig.hasAuth()) {
-            val auth = AuthenticationBuilder()
-                    .addUsername(hostConfig.username)
-                    .addPassword(hostConfig.password)
-                .build()
-            builder.setAuthentication(auth)
-        }
-        return builder.build()
-    }
+    private fun createRepo(hostConfig: HostConfig) =
+            RemoteRepository.Builder(hostConfig.name, "default", hostConfig.url).build()
 
     private val kobaltRepositories: List<RemoteRepository>
         get() = Kobalt.repos.map {
@@ -165,9 +105,6 @@ class KobaltMavenResolver @Inject constructor(val settings: KobaltSettings,
             }
         }
 
-    private fun createRepos(repos: List<String>) : List<RemoteRepository>
-            = kobaltRepositories + repos.map { createRepo(HostConfig(it)) }
-
     private fun createCollectRequest(id: String, scope: Scope? = null, repos: List<String> = emptyList())
             = CollectRequest().apply {
         val allIds = arrayListOf(MavenId.toMavenId(id))
@@ -175,6 +112,6 @@ class KobaltMavenResolver @Inject constructor(val settings: KobaltSettings,
         dependencies = allIds.map { Dependency(DefaultArtifact(it), scope?.scope) }
 
         root = Dependency(DefaultArtifact(MavenId.toMavenId(id)), scope?.scope)
-        repositories = createRepos(repos)
+        repositories = kobaltRepositories + repos.map { createRepo(HostConfig(it)) }
     }
 }

modules/kobalt-plugin-api/src/main/kotlin/com/beust/kobalt/maven/aether/Scope.kt

@@ -12,7 +12,6 @@ sealed class Scope(val scope: String, val dependencyLambda: (Project) -> List<IC
 
     object COMPILE : Scope(JavaScopes.COMPILE, Project::compileDependencies)
     object PROVIDED : Scope(JavaScopes.PROVIDED, Project::compileProvidedDependencies)
-    object COMPILEONLY : Scope("compileOnly", Project::compileOnlyDependencies)
     object SYSTEM : Scope(JavaScopes.SYSTEM, { project -> emptyList() })
     object RUNTIME : Scope(JavaScopes.RUNTIME, Project::compileRuntimeDependencies)
     object TEST : Scope(JavaScopes.TEST, Project::testDependencies)

modules/kobalt-plugin-api/src/main/kotlin/com/beust/kobalt/misc/Git.kt

@@ -6,13 +6,12 @@ import com.google.inject.Inject
 import java.io.File
 
 class Git @Inject constructor() {
-    fun maybeTagRelease(project: Project, uploadResult: TaskResult, enabled: Boolean, annotated: Boolean,
-                        push: Boolean, tag: String, message: String) : TaskResult {
+    fun maybeTagRelease(project: Project, uploadResult: TaskResult, enabled: Boolean, annotated: Boolean, tag: String, message: String) : TaskResult {
         val result =
                 if (uploadResult.success && enabled) {
-                    val tagSuccess = tagRelease(project, annotated, push, tag, message)
+                    val tagSuccess = tagRelease(project, annotated, tag, message)
                     if (! tagSuccess) {
-                        TaskResult(false, errorMessage  = "Couldn't tag the project")
+                        TaskResult(false, "Couldn't tag the project")
                     } else {
                         TaskResult()
                     }
@@ -22,7 +21,7 @@ class Git @Inject constructor() {
         return result
     }
 
-    private fun tagRelease(project: Project, annotated: Boolean, push: Boolean, tag: String, message: String) : Boolean {
+    private fun tagRelease(project: Project, annotated: Boolean, tag: String, message: String) : Boolean {
         val version = if (tag.isNullOrBlank()) project.version else tag
         val success = try {
             log(2, "Tagging this release as \"$version\"")
@@ -38,9 +37,7 @@ class Git @Inject constructor() {
             } else {
                 git.tag().setName(version).setMessage(message).call()
             }
-            if (push) {
-                git.push().setPushTags().call()
-            }
+            git.push().setPushTags().call()
             true
         } catch(ex: Exception) {
             warn("Couldn't create tag ${version}: ${ex.message}", ex)

modules/kobalt-plugin-api/src/main/kotlin/com/beust/kobalt/misc/GithubApi2.kt

@@ -86,12 +86,12 @@ class GithubApi2 @Inject constructor(
                 .execute()
         val code = response.code()
         if (code != Http.CREATED) {
-            val error = Gson().fromJson(response.errorBody()?.string(), RetrofitError::class.java)
+            val error = Gson().fromJson(response.errorBody().string(), RetrofitError::class.java)
             throw KobaltException("Couldn't upload release, ${error.message}: " + error.errors[0].code)
         } else {
             val body = response.body()
 
-            uploadAsset(accessToken, body?.uploadUrl!!, Http.TypedFile("application/zip", zipFile), tagName)
+            uploadAsset(accessToken, body.uploadUrl!!, Http.TypedFile("application/zip", zipFile), tagName)
                     .toBlocking()
                 .forEach { action ->
                     kobaltLog(1, "\n${zipFile.name} successfully uploaded")
@@ -120,8 +120,8 @@ class GithubApi2 @Inject constructor(
                         Duration.between(VersionCheckTimestampFile.timestamp, Instant.now())) {
                     kobaltLog(2, "Skipping GitHub latest release check, too soon.")
                 } else {
-                    val username = localProperties.getNoThrows(PROPERTY_USERNAME)
-                    val accessToken = localProperties.getNoThrows(PROPERTY_ACCESS_TOKEN)
+                    val username = localProperties.getNoThrows(PROPERTY_USERNAME, DOC_URL)
+                    val accessToken = localProperties.getNoThrows(PROPERTY_ACCESS_TOKEN, DOC_URL)
                     try {
                         val req =
                                 if (username != null && accessToken != null) {
@@ -138,8 +138,8 @@ class GithubApi2 @Inject constructor(
                             val releases = ex.body()
                             if (releases != null) {
                                 releases.firstOrNull()?.let {
-                                    result = try {
-                                        listOf(it.name, it.tagName).filterNotNull().first { !it.isBlank() }
+                                    try {
+                                        result = listOf(it.name, it.tagName).filterNotNull().first { !it.isBlank() }
                                     } catch(ex: NoSuchElementException) {
                                         throw KobaltException("Couldn't find the latest release")
                                     }

modules/kobalt-plugin-api/src/main/kotlin/com/beust/kobalt/misc/JarUtils.kt

@@ -1,16 +1,16 @@
 package com.beust.kobalt.misc
 
-import com.beust.kobalt.From
+import com.beust.kobalt.Glob
 import com.beust.kobalt.IFileSpec
-import com.beust.kobalt.IncludedFile
-import com.beust.kobalt.To
-import com.beust.kobalt.archive.MetaArchive
 import com.google.common.io.CharStreams
-import java.io.File
-import java.io.FileOutputStream
-import java.io.InputStreamReader
+import java.io.*
+import java.nio.file.Paths
+import java.util.jar.JarEntry
 import java.util.jar.JarFile
+import java.util.jar.JarInputStream
+import java.util.zip.ZipEntry
 import java.util.zip.ZipFile
+import java.util.zip.ZipOutputStream
 
 class JarUtils {
     companion object {
@@ -21,15 +21,18 @@ class JarUtils {
             }
         }
 
-        fun addFiles(directory: String, files: List<IncludedFile>, metaArchive: MetaArchive,
+        fun addFiles(directory: String, files: List<IncludedFile>, target: ZipOutputStream,
                 expandJarFiles: Boolean,
                 onError: (Exception) -> Unit = DEFAULT_HANDLER) {
             files.forEach {
-                addSingleFile(directory, it, metaArchive, expandJarFiles, onError)
+                addSingleFile(directory, it, target, expandJarFiles, onError)
             }
         }
 
-        fun addSingleFile(directory: String, file: IncludedFile, metaArchive: MetaArchive,
+        private val DEFAULT_JAR_EXCLUDES =
+                Glob("META-INF/*.SF", "META-INF/*.DSA", "META-INF/*.RSA")
+
+        fun addSingleFile(directory: String, file: IncludedFile, outputStream: ZipOutputStream,
                 expandJarFiles: Boolean, onError: (Exception) -> Unit = DEFAULT_HANDLER) {
             val foundFiles = file.allFromFiles(directory)
             foundFiles.forEach { foundFile ->
@@ -48,24 +51,50 @@ class JarUtils {
 
                     // Directory
                     val includedFile = IncludedFile(From(""), To(""), listOf(IFileSpec.GlobSpec("**")))
-                    addSingleFile(localFile.path, includedFile, metaArchive, expandJarFiles)
+                    addSingleFile(localFile.path, includedFile, outputStream, expandJarFiles)
                 } else {
-                    try {
-                        if (file.expandJarFiles && foundFile.name.endsWith(".jar") && !file.from.contains("resources")) {
-                            kobaltLog(2, "  Writing contents of jar file $foundFile")
-                            metaArchive.addArchive(foundFile)
-                        } else {
-                            val toPath = File(file.to).normalize().path
-                            val finalPath = if (toPath.isEmpty()) null else (toPath + "/")
-                            metaArchive.addFile(File(directory, fromFile.path), foundFile, finalPath)
+                    if (file.expandJarFiles && foundFile.name.endsWith(".jar") && ! file.from.contains("resources")) {
+                        kobaltLog(2, "  Writing contents of jar file $foundFile")
+                        val stream = JarInputStream(FileInputStream(localFile))
+                        var entry = stream.nextEntry
+                        while (entry != null) {
+                            if (!entry.isDirectory && !KFiles.isExcluded(entry.name, DEFAULT_JAR_EXCLUDES)) {
+                                val ins = JarFile(localFile).getInputStream(entry)
+                                addEntry(ins, JarEntry(entry), outputStream, onError)
+                            }
+                            entry = stream.nextEntry
                         }
-                    } catch(ex: Exception) {
-                        onError(ex)
+                    } else {
+                        val entryFileName = KFiles.fixSlashes(file.to(foundFile.path))
+                        val entry = JarEntry(entryFileName)
+                        entry.time = localFile.lastModified()
+                        addEntry(FileInputStream(localFile), entry, outputStream, onError)
                     }
                 }
             }
         }
 
+        private fun addEntry(inputStream: InputStream, entry: ZipEntry, outputStream: ZipOutputStream,
+                onError: (Exception) -> Unit = DEFAULT_HANDLER) {
+            var bis: BufferedInputStream? = null
+            try {
+                outputStream.putNextEntry(entry)
+                bis = BufferedInputStream(inputStream)
+
+                val buffer = ByteArray(50 * 1024)
+                while (true) {
+                    val count = bis.read(buffer)
+                    if (count == -1) break
+                    outputStream.write(buffer, 0, count)
+                }
+                outputStream.closeEntry()
+            } catch(ex: Exception) {
+                onError(ex)
+            } finally {
+                bis?.close()
+            }
+        }
+
         fun extractTextFile(zip : ZipFile, fileName: String) : String? {
             val enumEntries = zip.entries()
             while (enumEntries.hasMoreElements()) {
@@ -105,3 +134,39 @@ class JarUtils {
     }
 }
 
+open class Direction(open val p: String) {
+    override fun toString() = path
+    fun isCurrentDir() = path == "./"
+    val path: String get() =
+        if (p.isEmpty()) "./"
+        else if (p.startsWith("/") || p.endsWith("/")) p
+        else p + "/"
+}
+
+class IncludedFile(val fromOriginal: From, val toOriginal: To, val specs: List<IFileSpec>,
+        val expandJarFiles: Boolean = false) {
+    constructor(specs: List<IFileSpec>, expandJarFiles: Boolean = false) : this(From(""), To(""), specs, expandJarFiles)
+    fun from(s: String) = File(if (fromOriginal.isCurrentDir()) s else KFiles.joinDir(from, s))
+    val from: String get() = fromOriginal.path.replace("\\", "/")
+    fun to(s: String) = File(if (toOriginal.isCurrentDir()) s else KFiles.joinDir(to, s))
+    val to: String get() = toOriginal.path.replace("\\", "/")
+    override fun toString() = toString("IncludedFile",
+            "files - ", specs.map { it.toString() },
+            "from", from,
+            "to", to)
+
+    fun allFromFiles(directory: String? = null): List<File> {
+        val result = arrayListOf<File>()
+        specs.forEach { spec ->
+//            val fullDir = if (directory == null) from else KFiles.joinDir(directory, from)
+            spec.toFiles(directory, from).forEach { source ->
+                result.add(if (source.isAbsolute) source else File(source.path))
+            }
+        }
+        return result.map { Paths.get(it.path).normalize().toFile()}
+    }
+}
+
+class From(override val p: String) : Direction(p)
+
+class To(override val p: String) : Direction(p)

modules/kobalt-plugin-api/src/main/kotlin/com/beust/kobalt/misc/KFiles.kt

@@ -4,38 +4,20 @@ import com.beust.kobalt.*
 import com.beust.kobalt.api.Kobalt
 import com.beust.kobalt.api.Project
 import com.beust.kobalt.maven.Md5
-import org.apache.commons.io.FileUtils
 import java.io.*
 import java.nio.file.Files
 import java.nio.file.Path
 import java.nio.file.Paths
 import java.nio.file.StandardCopyOption
-import java.util.*
 import java.util.jar.JarInputStream
-import java.util.regex.Pattern
-
 
 class KFiles {
     /**
      * This actually returns a list of strings because in development mode, we are not pointing to a single
-     * jar file but to a set of classes/directories.
+     * jar file but to a set of /classes directories.
      */
     val kobaltJar : List<String>
         get() {
-            val PATTERN = Pattern.compile("kobalt-([-.0-9]+)")
-
-            fun latestInstalledVersion() : StringVersion {
-                val versions = File(distributionsDir).listFiles().map { it.name }.map {
-                    val matcher = PATTERN.matcher(it)
-                    val result =
-                        if (matcher.matches()) matcher.group(1)
-                        else null
-                    result
-                }.filterNotNull().map(::StringVersion)
-                Collections.sort(versions, reverseOrder())
-                return versions[0]
-            }
-
             val envJar = System.getenv("KOBALT_JAR")
             if (envJar != null) {
                 debug("Using kobalt jar $envJar")
@@ -47,21 +29,19 @@ class KFiles {
                 if (jarFile.exists()) {
                     return listOf(jarFile.absolutePath)
                 } else {
-                    // In development mode, keep your kobalt.properties version to a nonexistent version
+                    // In development mode, keep your kobalt.properties version one above kobalt-wrapper.properties:
                     // kobalt.properties:  kobalt.version=0.828
                     // kobalt-wrapper.properties: kobalt.version=0.827
                     // When Kobalt can't find the newest jar file, it will instead use the classes produced by IDEA
                     // in the directories specified here:
-                    val previousVersion = latestInstalledVersion().version
+                    val leftSuffix = Kobalt.version.substring(0, Kobalt.version.lastIndexOf(".") + 1)
+                    val previousVersion = leftSuffix +
+                            (Kobalt.version.split(".").let { it[it.size - 1] }.toInt() - 1).toString()
                     val previousJar = joinDir(distributionsDir, "kobalt-" + previousVersion,
                             "kobalt/wrapper/kobalt-$previousVersion.jar")
-                    latestInstalledVersion()
                     val result = listOf("", "modules/kobalt-plugin-api", "modules/wrapper").map {
-                        File(homeDir(KFiles.joinDir("kotlin", "kobalt", it, "kobaltBuild", "classes"))) //kobalt build dirs
-                                .absolutePath
-                    } + listOf("modules/kobalt", "modules/kobalt-plugin-api", "modules/wrapper").map {
-                        File(homeDir(KFiles.joinDir("kotlin", "kobalt", it, "target", "classes"))) //maven build dirs
-                                .absolutePath
+                        File(homeDir(KFiles.joinDir("kotlin", "kobalt", it, "kobaltBuild", "classes")))
+                            .absolutePath
                     } + listOf(previousJar)
                     debug("Couldn't find ${jarFile.absolutePath}, using\n  " + result.joinToString(" "))
                     return result.filter { File(it).exists() }
@@ -111,12 +91,10 @@ class KFiles {
          */
         fun joinDir(vararg ts: String): String = ts.toMutableList().joinToString(File.separator)
 
-        val LIBS_DIR = "libs"
-
         /**
          * Where assemblies get generated ("kobaltBuild/libs")
          */
-        fun libsDir(project: Project): String = KFiles.makeDir(KFiles.buildDir(project).path, LIBS_DIR).path
+        fun libsDir(project: Project): String = KFiles.makeDir(KFiles.buildDir(project).path, "libs").path
 
         /**
          * The paths elements are expected to be a directory. Make that directory and join the
@@ -137,7 +115,7 @@ class KFiles {
         fun joinFileAndMakeDir(vararg ts: String) = joinDir(joinAndMakeDir(ts.slice(0..ts.size - 2)), ts[ts.size - 1])
 
         fun fixSlashes(f: File) = f.normalize().path.replace('\\', '/')
-        fun fixSlashes(s: String) = s.replace('\\', '/')
+        fun fixSlashes(s: String) = fixSlashes(File(s))
 
         fun makeDir(dir: String, s: String? = null) =
                 (if (s != null) File(dir, s) else File(dir)).apply { mkdirs() }
@@ -216,6 +194,69 @@ class KFiles {
             }
         }
 
+        fun copyRecursively(from: File, to: File, replaceExisting: Boolean = true, deleteFirst: Boolean = false,
+                onError: (File, IOException) -> OnErrorAction = { _, exception -> throw exception }) {
+            // Need to wait until copyRecursively supports an overwrite: Boolean = false parameter
+            // Until then, wipe everything first
+            if (deleteFirst) to.deleteRecursively()
+//            to.mkdirs()
+            hackCopyRecursively(from, to, replaceExisting = replaceExisting, onError = onError)
+        }
+
+        /** Private exception class, used to terminate recursive copying */
+        private class TerminateException(file: File) : FileSystemException(file) {}
+
+        /**
+         * Copy/pasted from kotlin/io/Utils.kt to add support for overwriting.
+         */
+        private fun hackCopyRecursively(from: File, dst: File,
+                replaceExisting: Boolean,
+                onError: (File, IOException) -> OnErrorAction =
+                { _, exception -> throw exception }
+        ): Boolean {
+            if (!from.exists()) {
+                return onError(from, NoSuchFileException(file = from, reason = "The source file doesn't exist")) !=
+                        OnErrorAction.TERMINATE
+            }
+            try {
+                // We cannot break for loop from inside a lambda, so we have to use an exception here
+                for (src in from.walkTopDown().onFail { f, e ->
+                    if (onError(f, e) == OnErrorAction.TERMINATE) throw TerminateException(f)
+                }) {
+                    if (!src.exists()) {
+                        if (onError(src, NoSuchFileException(file = src, reason = "The source file doesn't exist")) ==
+                                OnErrorAction.TERMINATE)
+                            return false
+                    } else {
+                        val relPath = src.relativeTo(from)
+                        val dstFile = File(KFiles.joinDir(dst.path, relPath.path))
+                        if (dstFile.exists() && !replaceExisting && !(src.isDirectory && dstFile.isDirectory)) {
+                            if (onError(dstFile, FileAlreadyExistsException(file = src,
+                                    other = dstFile,
+                                    reason = "The destination file already exists")) == OnErrorAction.TERMINATE)
+                                return false
+                        } else if (src.isDirectory) {
+                            dstFile.mkdirs()
+                        } else {
+                            if (Features.USE_TIMESTAMPS && dstFile.exists() && Md5.toMd5(src) == Md5.toMd5(dstFile)) {
+                                kobaltLog(3, "  Identical files, not copying $src to $dstFile")
+                            } else {
+                                val target = src.copyTo(dstFile, true)
+                                if (target.length() != src.length()) {
+                                    if (onError(src,
+                                            IOException("src.length() != dst.length()")) == OnErrorAction.TERMINATE)
+                                        return false
+                                }
+                            }
+                        }
+                    }
+                }
+                return true
+            } catch (e: TerminateException) {
+                return false
+            }
+        }
+
         /**
          * The build location for build scripts is .kobalt/build
          */
@@ -245,18 +286,22 @@ class KFiles {
         private fun isWindows() = System.getProperty("os.name").contains("Windows")
 
         fun copy(from: Path?, to: Path?, option: StandardCopyOption = StandardCopyOption.REPLACE_EXISTING) {
-            try {
-                if (from != null && to != null) {
-                    if (!Files.exists(to) || Md5.toMd5(from.toFile()) != Md5.toMd5(to.toFile())) {
-                        kobaltLog(3, "Copy from $from to $to")
-                        Files.copy(from, to, option)
-                    } else {
-                        kobaltLog(3, "  Not copying, indentical files: $from $to")
+            if (isWindows() && to!!.toFile().exists()) {
+                kobaltLog(2, "Windows detected, not overwriting $to")
+            } else {
+                try {
+                    if (from != null && to != null) {
+                        if (!Files.exists(to) || Md5.toMd5(from.toFile()) != Md5.toMd5(to.toFile())) {
+                            kobaltLog(3, "Copy from $from to $to")
+                            Files.copy(from, to, option)
+                        } else {
+                            kobaltLog(3, "  Not copying, indentical files: $from $to")
+                        }
                     }
+                } catch(ex: IOException) {
+                    // Windows is anal about this
+                    kobaltLog(1, "Couldn't copy $from to $to: ${ex.message}")
                 }
-            } catch(ex: IOException) {
-                // Windows is anal about this
-                kobaltLog(1, "Couldn't copy $from to $to: ${ex.message}")
             }
         }
 
@@ -341,35 +386,6 @@ class KFiles {
         }
 
         val dotKobaltDir = File(KFiles.joinAndMakeDir(KFiles.KOBALT_DOT_DIR))
-
-        /**
-         * Turn the IncludedFiles into actual Files
-         */
-        fun materializeIncludedFiles(project: Project, includedFiles: List<IncludedFile>) : List<File> {
-            val result = includedFiles.fold(arrayListOf<File>()) { files, includedFile: IncludedFile ->
-                val foundFiles = includedFile.allFromFiles(project.directory)
-                val absFiles = foundFiles.map {
-                    if (it.isAbsolute) {
-                        it
-                    } else if (File(includedFile.from).isAbsolute) {
-                        File(includedFile.from, it.path)
-                    } else {
-                        File(KFiles.joinDir(project.directory, includedFile.from, it.path))
-                    }
-                }
-                files.addAll(absFiles)
-                files
-            }
-            return result
-        }
-
-        fun copyRecursively(from: File, to: File, replaceExisting: Boolean = true, deleteFirst: Boolean = false) {
-// fun copy(relativePath: String, sourceDir: File, targetDir: File) =
-//            sourceDir.resolve(relativePath).copyRecursively(targetDir.resolve(relativePath), overwrite = true)
-            if (from.isFile) FileUtils.copyFileToDirectory(from, to)
-            else FileUtils.copyDirectory(from, to)
-        }
-
     }
 
     fun findRecursively(directory: File, function: Function1<String, Boolean>): List<String> {

modules/kobalt-plugin-api/src/main/kotlin/com/beust/kobalt/misc/KobaltLogger.kt

@@ -1,9 +1,6 @@
 package com.beust.kobalt.misc
 
-import com.beust.kobalt.Args
-import com.beust.kobalt.AsciiArt
-import com.beust.kobalt.Constants
-import com.beust.kobalt.KobaltException
+import com.beust.kobalt.*
 import com.beust.kobalt.api.Kobalt
 import com.beust.kobalt.maven.aether.Exceptions
 import java.lang.Exception
@@ -60,14 +57,6 @@ object KobaltLogger {
         } else {
             Logger(false)
         }
-
-    fun setLogLevel(args: Args) {
-        LOG_LEVEL = when {
-            args.log < Constants.LOG_QUIET_LEVEL -> Constants.LOG_DEFAULT_LEVEL
-            args.log > Constants.LOG_MAX_LEVEL -> Constants.LOG_MAX_LEVEL
-            else -> args.log
-        }
-    }
 }
 
 class Logger(val dev: Boolean) {
@@ -86,8 +75,7 @@ class Logger(val dev: Boolean) {
 
     fun error(tag: String, message: CharSequence, e: Throwable? = null) {
         val docUrl = if (e is KobaltException && e.docUrl != null) e.docUrl else null
-        val text =
-            if (message.isNotBlank()) message
+        val text = if (! message.isBlank()) message
             else if (e != null && (! e.message.isNullOrBlank())) e.message
             else { e?.toString() }
         val shortMessage = "***** E $text " + if (docUrl != null) " Documentation: $docUrl" else ""
@@ -100,10 +88,7 @@ class Logger(val dev: Boolean) {
     }
 
     fun warn(tag: String, message: CharSequence, e: Throwable? = null) {
-        val fullMessage = "***** WARNING " +
-                if (message.isNotBlank()) message
-                else if (e != null && (!e.message.isNullOrBlank())) e.message
-                else e?.toString()
+        val fullMessage = "***** WARNING " + (e?.message ?: message)
         println(AsciiArt.Companion.warnColor(getPattern("W", fullMessage, fullMessage, tag)))
         if (KobaltLogger.LOG_LEVEL > 1 && e != null) {
             Exceptions.printStackTrace(e)

modules/kobalt-plugin-api/src/main/kotlin/com/beust/kobalt/misc/KobaltWrapperProperties.kt

@@ -24,7 +24,7 @@ class KobaltWrapperProperties @Inject constructor() {
     }
 
     private fun defaultUrlFor(version: String) =
-            "https://beust.com/kobalt/kobalt-$version.zip"
+            "http://beust.com/kobalt/kobalt-$version.zip"
 
     private val file: File
             get() = File("$WRAPPER_DIR/$KOBALT_WRAPPER_PROPERTIES")

modules/kobalt-plugin-api/src/main/kotlin/com/beust/kobalt/misc/LocalProperties.kt

@@ -6,9 +6,6 @@ import java.nio.file.Files
 import java.nio.file.Paths
 import java.util.*
 
-/**
- * Encapsulate read access to local.properties.
- */
 @Singleton
 class LocalProperties {
     val localProperties: Properties by lazy {
@@ -25,11 +22,11 @@ class LocalProperties {
         result
     }
 
-    fun getNoThrows(name: String): String? = localProperties.getProperty(name)
+    fun getNoThrows(name: String, docUrl: String? = null) = localProperties.getProperty(name)
 
     fun get(name: String, docUrl: String? = null) : String {
-        val result = getNoThrows(name)
+        val result = getNoThrows(name, docUrl)
                 ?: throw KobaltException("Couldn't find $name in local.properties", docUrl = docUrl)
-        return result
+        return result as String
     }
 }

modules/kobalt-plugin-api/src/main/kotlin/com/beust/kobalt/misc/NewRunCommand.kt

@@ -19,7 +19,6 @@ class RunCommandInfo {
      */
     var useErrorStreamAsErrorIndicator : Boolean = true
     var useInputStreamAsErrorIndicator : Boolean = false
-    var ignoreExitValue : Boolean = false
 
     var errorCallback: Function1<List<String>, Unit> = NewRunCommand.DEFAULT_ERROR
     var successCallback: Function1<List<String>, Unit> = NewRunCommand.DEFAULT_SUCCESS
@@ -79,31 +78,19 @@ open class NewRunCommand(val info: RunCommandInfo) {
         val process = pb.start()
 
         // Run the command and collect the return code and streams
-        val processFinished = process.waitFor(120, TimeUnit.SECONDS)
-
-        if (!processFinished)
-            kobaltError("process timed out!")
-
-        val input =
-                if (process.inputStream.available() > 0) fromStream(process.inputStream)
-                else listOf()
-        val error =
-                if (process.errorStream.available() > 0) fromStream(process.errorStream)
-                else listOf()
-
-        kobaltLog(3, "info contains errors: " + (info.containsErrors != null))
+        val returnCode = process.waitFor(30, TimeUnit.SECONDS)
+        val input = if (process.inputStream.available() > 0) fromStream(process.inputStream)
+        else listOf()
+        val error = if (process.errorStream.available() > 0) fromStream(process.errorStream)
+        else listOf()
 
         // Check to see if the command succeeded
         val isSuccess =
                 if (info.containsErrors != null) ! info.containsErrors!!(error)
-                else isSuccess(if (info.ignoreExitValue) true else processFinished, input, error)
+                else isSuccess(returnCode, input, error)
 
         if (isSuccess) {
-            if (!info.useErrorStreamAsErrorIndicator) {
-                info.successCallback(error + input)
-            } else {
-                info.successCallback(input)
-            }
+            info.successCallback(input)
         } else {
             info.errorCallback(error + input)
         }
@@ -116,12 +103,12 @@ open class NewRunCommand(val info: RunCommandInfo) {
      * have various ways to signal errors.
      */
     open protected fun isSuccess(isSuccess: Boolean, input: List<String>, error: List<String>) : Boolean {
-        var hasErrors: Boolean = ! isSuccess
+        var hasErrors = ! isSuccess
         if (info.useErrorStreamAsErrorIndicator && ! hasErrors) {
-            hasErrors = hasErrors || error.isNotEmpty()
+            hasErrors = hasErrors || error.size > 0
         }
         if (info.useInputStreamAsErrorIndicator && ! hasErrors) {
-            hasErrors = hasErrors || input.isNotEmpty()
+            hasErrors = hasErrors || input.size > 0
         }
 
         return ! hasErrors

modules/kobalt-plugin-api/src/main/kotlin/com/beust/kobalt/misc/RunCommand.kt

@@ -0,0 +1,90 @@
+package com.beust.kobalt.misc
+
+import java.io.BufferedReader
+import java.io.File
+import java.io.InputStream
+import java.io.InputStreamReader
+import java.util.concurrent.TimeUnit
+
+open class RunCommand(val command: String) {
+    val DEFAULT_SUCCESS = { output: List<String> -> }
+//    val DEFAULT_SUCCESS_VERBOSE = { output: List<String> -> kobaltLog(2, "Success:\n " + output.joinToString("\n"))}
+    val defaultSuccess = DEFAULT_SUCCESS
+    val DEFAULT_ERROR = {
+        output: List<String> -> error(output.joinToString("\n       "))
+    }
+
+    var directory = File(".")
+    var env = hashMapOf<String, String>()
+
+    /**
+     * Some commands fail but return 0, so the only way to find out if they failed is to look
+     * at the error stream. However, some commands succeed but output text on the error stream.
+     * This field is used to specify how errors are caught.
+     */
+    var useErrorStreamAsErrorIndicator = true
+    var useInputStreamAsErrorIndicator = false
+
+    fun useErrorStreamAsErrorIndicator(f: Boolean) : RunCommand {
+        useErrorStreamAsErrorIndicator = f
+        return this
+    }
+
+    open fun run(args: List<String>,
+            errorCallback: Function1<List<String>, Unit> = DEFAULT_ERROR,
+            successCallback: Function1<List<String>, Unit> = defaultSuccess) : Int {
+        val allArgs = arrayListOf<String>()
+        allArgs.add(command)
+        allArgs.addAll(args)
+
+        val pb = ProcessBuilder(allArgs)
+        pb.directory(directory)
+        kobaltLog(2, "Running command in directory ${directory.absolutePath}" +
+            "\n  " + allArgs.joinToString(" "))
+        val process = pb.start()
+        pb.environment().let { pbEnv ->
+            env.forEach {it ->
+                pbEnv.put(it.key, it.value)
+            }
+        }
+        val callSucceeded = process.waitFor(30, TimeUnit.SECONDS)
+        val input = if (process.inputStream.available() > 0) fromStream(process.inputStream) else emptyList()
+        val error = if (process.errorStream.available() > 0) fromStream(process.errorStream) else emptyList()
+        val isSuccess = isSuccess(callSucceeded, input, error)
+
+        if (isSuccess) {
+            successCallback(input)
+        } else {
+            errorCallback(error + input)
+        }
+
+        return if (isSuccess) 0 else 1
+    }
+
+    open protected fun isSuccess(callSucceeded: Boolean, input: List<String>, error: List<String>) : Boolean {
+        var hasErrors = ! callSucceeded
+        if (useErrorStreamAsErrorIndicator && ! hasErrors) {
+            hasErrors = hasErrors || error.size > 0
+        }
+        if (useInputStreamAsErrorIndicator && ! hasErrors) {
+            hasErrors = hasErrors || input.size > 0
+        }
+
+        return ! hasErrors
+    }
+
+    private fun fromStream(ins: InputStream) : List<String> {
+        val result = arrayListOf<String>()
+        val br = BufferedReader(InputStreamReader(ins))
+        var line = br.readLine()
+
+        while (line != null) {
+            result.add(line)
+            line = br.readLine()
+        }
+        return result
+
+//        val result = CharStreams.toString(InputStreamReader(ins, Charset.defaultCharset()))
+//        return result.split("\n")
+    }
+}

modules/kobalt-plugin-api/src/main/kotlin/com/beust/kobalt/misc/StringVersion.kt

@@ -29,12 +29,8 @@ class StringVersion(val version: String) : Comparable<StringVersion> {
                 if (v1 < v2) return -1
                 else if (v1 > v2) return 1
             } catch(ex: NumberFormatException) {
-                if (version == other.toString()) {
-                    return 0
-                } else {
-                    log(2, "Couldn't parse version $version or $other")
-                    return -1
-                }
+                warn("Couldn't parse version $version or $other")
+                return -1
             }
         }
         return 0

modules/kobalt/build.gradle

@@ -1,79 +0,0 @@
-plugins {
-    id 'org.jetbrains.kotlin.jvm' version '1.2.71'
-    id 'com.github.johnrengelman.shadow' version '5.0.0'
-}
-
-dependencies {
-    implementation project(':wrapper')
-    implementation project(':kobalt-plugin-api')
-    implementation "biz.aQute.bnd:biz.aQute.bndlib:$bndlib"
-    implementation 'com.github.spullara.mustache.java:compiler:0.9.5'
-    implementation "com.google.code.findbugs:jsr305:$findbugs"
-    implementation "com.sparkjava:spark-core:$spark"
-    implementation "com.squareup.okhttp3:logging-interceptor:$okhttp"
-    implementation 'com.sun.activation:javax.activation:1.2.0'
-    implementation "com.sun.xml.bind:jaxb-core:$jaxb"
-    implementation "com.sun.xml.bind:jaxb-impl:$jaxb"
-    implementation "javax.inject:javax.inject:$inject"
-    implementation "javax.xml.bind:jaxb-api:$jaxb"
-    implementation "org.apache.maven.resolver:maven-resolver-spi:$mavenResolver"
-    implementation "org.codehaus.groovy:groovy:$groovy"
-    implementation "com.beust:jcommander:$jcommander"
-    implementation "com.google.code.gson:gson:$gson"
-    implementation "com.google.inject:guice:$guice"
-    implementation "com.google.inject.extensions:guice-assistedinject:$guice"
-    implementation "com.squareup.retrofit2:converter-gson:$retrofit"
-    implementation "com.squareup.retrofit2:retrofit:$retrofit"
-    implementation "org.apache.maven:maven-model:$maven"
-    implementation "org.jetbrains.kotlin:kotlin-compiler-embeddable:$kotlin"
-    implementation "org.jetbrains.kotlin:kotlin-stdlib:$kotlin"
-    testImplementation 'org.assertj:assertj-core:3.8.0'
-    testImplementation "org.jetbrains.kotlin:kotlin-test:$kotlin"
-    testImplementation "org.testng:testng:$testng"
-}
-
-sourceSets {
-    main.kotlin.srcDirs += "${rootProject.projectDir}../../src/main/kotlin"
-    test.kotlin.srcDirs += "${rootProject.projectDir}../../src/test/kotlin"
-}
-
-shadowJar {
-    classifier = null
-}
-
-test {
-    useTestNG()
-}
-
-publishing {
-    publications {
-        shadow(MavenPublication) { publication ->
-            project.shadow.component(publication)
-            artifact sourcesJar
-            artifact javadocJar
-
-            pom {
-                name = project.name
-                description = 'A build system in Kotlin'
-                url = 'https://beust.com/kobalt'
-                licenses {
-                    license {
-                        name = 'Apache-2.0'
-                        url = 'https://www.apache.org/licenses/LICENSE-2.0'
-                    }
-                }
-                developers {
-                    developer {
-                        name = 'Cedric Beust'
-                        email = 'cedric@beust.com'
-                    }
-                }
-                scm {
-                    connection = 'scm:https://github.com/cbeust/kobalt.git'
-                    developerConnection = 'scm:git@github.com:cbeust/kobalt.git'
-                    url = 'https://github.com/cbeust/kobalt'
-                }
-            }
-        }
-    }
-}

modules/kobalt/pom.xml

@@ -1,231 +0,0 @@
-<project xmlns="http://maven.apache.org/POM/4.0.0" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
-         xsi:schemaLocation="http://maven.apache.org/POM/4.0.0 http://maven.apache.org/xsd/maven-4.0.0.xsd">
-    <modelVersion>4.0.0</modelVersion>
-    <parent>
-        <groupId>com.beust</groupId>
-        <artifactId>kobalt-pom</artifactId>
-        <version>1.1.0</version>
-        <relativePath>../..</relativePath>
-    </parent>
-
-    <artifactId>kobalt</artifactId>
-    <packaging>jar</packaging>
-    <version>1.1.0</version>
-
-    <dependencies>
-        <dependency>
-            <groupId>com.beust</groupId>
-            <artifactId>kobalt-plugin-api</artifactId>
-            <version>1.1.0</version>
-        </dependency>
-        <dependency>
-            <groupId>com.beust</groupId>
-            <artifactId>wrapper</artifactId>
-            <version>1.1.0</version>
-        </dependency>
-        <dependency>
-            <groupId>org.jetbrains.kotlin</groupId>
-            <artifactId>kotlin-compiler-embeddable</artifactId>
-            <version>${kotlin.version}</version>
-        </dependency>
-        <dependency>
-            <groupId>org.jetbrains.kotlin</groupId>
-            <artifactId>kotlin-stdlib</artifactId>
-            <version>${kotlin.version}</version>
-        </dependency>
-        <dependency>
-            <groupId>com.github.spullara.mustache.java</groupId>
-            <artifactId>compiler</artifactId>
-            <version>0.9.5</version>
-            <scope>compile</scope>
-        </dependency>
-        <dependency>
-            <groupId>javax.inject</groupId>
-            <artifactId>javax.inject</artifactId>
-            <version>1</version>
-            <scope>compile</scope>
-        </dependency>
-        <dependency>
-            <groupId>com.google.inject</groupId>
-            <artifactId>guice</artifactId>
-            <version>4.2.2</version>
-        </dependency>
-        <dependency>
-            <groupId>com.google.inject.extensions</groupId>
-            <artifactId>guice-assistedinject</artifactId>
-            <version>4.2.2</version>
-        </dependency>
-        <dependency>
-            <groupId>com.beust</groupId>
-            <artifactId>jcommander</artifactId>
-            <version>1.72</version>
-        </dependency>
-        <dependency>
-            <groupId>org.apache.maven</groupId>
-            <artifactId>maven-model</artifactId>
-            <version>3.5.2</version>
-        </dependency>
-        <dependency>
-            <groupId>com.google.code.findbugs</groupId>
-            <artifactId>jsr305</artifactId>
-            <version>3.0.2</version>
-        </dependency>
-        <dependency>
-            <groupId>com.google.code.gson</groupId>
-            <artifactId>gson</artifactId>
-            <version>2.8.2</version>
-        </dependency>
-        <dependency>
-            <groupId>com.squareup.retrofit2</groupId>
-            <artifactId>retrofit</artifactId>
-            <version>2.3.0</version>
-        </dependency>
-        <dependency>
-            <groupId>com.squareup.retrofit2</groupId>
-            <artifactId>converter-gson</artifactId>
-            <version>2.3.0</version>
-        </dependency>
-        <dependency>
-            <groupId>biz.aQute.bnd</groupId>
-            <artifactId>biz.aQute.bndlib</artifactId>
-            <version>3.5.0</version>
-        </dependency>
-        <dependency>
-            <groupId>com.squareup.okhttp3</groupId>
-            <artifactId>logging-interceptor</artifactId>
-            <version>${okhttp3.version}</version>
-        </dependency>
-        <dependency>
-            <groupId>com.sparkjava</groupId>
-            <artifactId>spark-core</artifactId>
-            <version>2.6.0</version>
-        </dependency>
-        <dependency>
-            <groupId>org.codehaus.groovy</groupId>
-            <artifactId>groovy</artifactId>
-            <version>2.4.12</version>
-        </dependency>
-        <dependency>
-            <groupId>org.apache.maven.resolver</groupId>
-            <artifactId>maven-resolver-spi</artifactId>
-            <version>${mavenresolver.version}</version>
-        </dependency>
-        <!-- java 9 -->
-        <dependency>
-            <groupId>javax.xml.bind</groupId>
-            <artifactId>jaxb-api</artifactId>
-            <version>2.3.0</version>
-        </dependency>
-        <dependency>
-            <groupId>com.sun.xml.bind</groupId>
-            <artifactId>jaxb-impl</artifactId>
-            <version>2.3.0</version>
-        </dependency>
-        <dependency>
-            <groupId>com.sun.xml.bind</groupId>
-            <artifactId>jaxb-core</artifactId>
-            <version>2.3.0</version>
-        </dependency>
-        <dependency>
-            <groupId>com.sun.activation</groupId>
-            <artifactId>javax.activation</artifactId>
-            <version>1.2.0</version>
-        </dependency>
-
-        <dependency>
-            <groupId>org.assertj</groupId>
-            <artifactId>assertj-core</artifactId>
-            <version>3.8.0</version>
-            <scope>test</scope>
-        </dependency>
-        <dependency>
-            <groupId>org.jetbrains.kotlin</groupId>
-            <artifactId>kotlin-test</artifactId>
-            <version>${kotlin.version}</version>
-            <scope>test</scope>
-        </dependency>
-        <dependency>
-            <groupId>org.testng</groupId>
-            <artifactId>testng</artifactId>
-            <version>${testng.version}</version>
-            <scope>test</scope>
-        </dependency>
-    </dependencies>
-
-    <build>
-        <plugins>
-            <plugin>
-                <groupId>org.jetbrains.kotlin</groupId>
-                <artifactId>kotlin-maven-plugin</artifactId>
-                <version>${kotlin.version}</version>
-                <executions>
-                    <execution>
-                        <id>compile</id>
-                        <goals> <goal>compile</goal> </goals>
-                        <configuration>
-                            <sourceDirs>
-                                <sourceDir>${project.basedir}../../src/main/kotlin</sourceDir>
-                            </sourceDirs>
-                        </configuration>
-                    </execution>
-                    <execution>
-                        <id>test-compile</id>
-                        <goals> <goal>test-compile</goal> </goals>
-                        <configuration>
-                            <sourceDirs>
-                                <sourceDir>${project.basedir}../../src/test/kotlin</sourceDir>
-                            </sourceDirs>
-                        </configuration>
-                    </execution>
-                </executions>
-            </plugin>
-            <plugin>
-                <groupId>org.apache.maven.plugins</groupId>
-                <artifactId>maven-compiler-plugin</artifactId>
-                <version>3.5.1</version>
-                <executions>
-                    <!-- Replacing default-compile as it is treated specially by maven -->
-                    <execution>
-                        <id>default-compile</id>
-                        <phase>none</phase>
-                    </execution>
-                    <!-- Replacing default-testCompile as it is treated specially by maven -->
-                    <execution>
-                        <id>default-testCompile</id>
-                        <phase>none</phase>
-                    </execution>
-                    <execution>
-                        <id>java-compile</id>
-                        <phase>compile</phase>
-                        <goals> <goal>compile</goal> </goals>
-                    </execution>
-                    <execution>
-                        <id>java-test-compile</id>
-                        <phase>test-compile</phase>
-                        <goals> <goal>testCompile</goal> </goals>
-                    </execution>
-                </executions>
-            </plugin>
-            <plugin>
-                <groupId>org.apache.maven.plugins</groupId>
-                <artifactId>maven-shade-plugin</artifactId>
-                <version>3.2.1</version>
-                <configuration>
-                    <transformers>
-                        <transformer implementation="org.apache.maven.plugins.shade.resource.ManifestResourceTransformer">
-                            <mainClass>com.beust.kobalt.MainKt</mainClass>
-                        </transformer>
-                    </transformers>
-                </configuration>
-                <executions>
-                    <execution>
-                        <phase>package</phase>
-                        <goals>
-                            <goal>shade</goal>
-                        </goals>
-                    </execution>
-                </executions>
-            </plugin>
-        </plugins>
-    </build>
-</project>

modules/wrapper/build.gradle

@@ -1,38 +0,0 @@
-jar {
-    manifest {
-        attributes 'Main-Class': 'com.beust.kobalt.wrapper.Main'
-    }
-}
-
-publishing {
-    publications {
-        maven(MavenPublication) {
-            from(components.java)
-            artifact sourcesJar
-            artifact javadocJar
-
-            pom {
-                name = project.name
-                description = 'Wrapper for Kobalt'
-                url = 'https://beust.com/kobalt'
-                licenses {
-                    license {
-                        name = 'Apache-2.0'
-                        url = 'https://www.apache.org/licenses/LICENSE-2.0'
-                    }
-                }
-                developers {
-                    developer {
-                        name = 'Cedric Beust'
-                        email = 'cedric@beust.com'
-                    }
-                }
-                scm {
-                    connection = 'scm:https://github.com/cbeust/kobalt.git'
-                    developerConnection = 'scm:git@github.com:cbeust/kobalt.git'
-                    url = 'https://github.com/cbeust/kobalt'
-                }
-            }
-        }
-    }
-}

modules/wrapper/pom.xml

@@ -1,28 +0,0 @@
-<project xmlns="http://maven.apache.org/POM/4.0.0" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
-         xsi:schemaLocation="http://maven.apache.org/POM/4.0.0 http://maven.apache.org/xsd/maven-4.0.0.xsd">
-    <modelVersion>4.0.0</modelVersion>
-    <parent>
-        <groupId>com.beust</groupId>
-        <artifactId>kobalt-pom</artifactId>
-        <version>1.1.0</version>
-        <relativePath>../..</relativePath>
-    </parent>
-
-    <artifactId>wrapper</artifactId>
-    <packaging>jar</packaging>
-    <version>1.1.0</version>
-
-    <build>
-        <plugins>
-            <plugin>
-                <groupId>org.apache.maven.plugins</groupId>
-                <artifactId>maven-compiler-plugin</artifactId>
-                <version>3.8.0</version>
-                <configuration>
-                    <source>1.7</source>
-                    <target>1.7</target>
-                </configuration>
-            </plugin>
-        </plugins>
-    </build>
-</project>

modules/wrapper/src/main/java/com/beust/kobalt/wrapper/Main.java

@@ -47,6 +47,7 @@ public class Main {
 
     private int installAndLaunchMain(String[] argv) throws IOException, InterruptedException {
         String version = getVersion();
+        initWrapperFile(version);
 
         List<String> kobaltArgv = new ArrayList<>();
         boolean noLaunch = false;
@@ -77,7 +78,6 @@ public class Main {
         }
         int result = 0;
         if (! exit) {
-            initWrapperFile(version);
             Path kobaltJarFile = installDistribution();
             if (!noLaunch) {
                 result = launchMain(kobaltJarFile, kobaltArgv);
@@ -118,7 +118,7 @@ public class Main {
     }
 
     private static String downloadUrl(String version) {
-        return "https://beust.com/kobalt/kobalt-" + version + ".zip";
+        return "http://beust.com/kobalt/kobalt-" + version + ".zip";
     }
 
     private void initWrapperFile(String version) throws IOException {
@@ -133,7 +133,7 @@ public class Main {
     }
 
     private String getWrapperVersion() {
-        return wrapperProperties.getProperty(PROPERTY_VERSION, "N/A");
+        return wrapperProperties.getProperty(PROPERTY_VERSION);
     }
 
     private String getWrapperDownloadUrl(String version) {
@@ -345,11 +345,6 @@ public class Main {
                     try {
                         Files.createDirectories(entryPath.getParent());
                         Files.copy(zipFile.getInputStream(entry), entryPath, StandardCopyOption.REPLACE_EXISTING);
-                        if (!isWindows() && entry.getName().endsWith(KOBALTW)) {
-                           if (!entryPath.toFile().setExecutable(true)) {
-                               log(1, "Couldn't make distribution " + KOBALTW + " executable");
-                           }
-                        }
                     } catch (FileSystemException ex) {
                         log(2, "Couldn't copy to " + entryPath);
                     }

pom.xml

@@ -1,34 +0,0 @@
-<project xmlns="http://maven.apache.org/POM/4.0.0" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
-         xsi:schemaLocation="http://maven.apache.org/POM/4.0.0 http://maven.apache.org/xsd/maven-4.0.0.xsd">
-    <modelVersion>4.0.0</modelVersion>
-
-    <groupId>com.beust</groupId>
-    <artifactId>kobalt-pom</artifactId>
-    <packaging>pom</packaging>
-    <version>1.1.0</version>
-
-    <modules>
-        <module>modules/kobalt-plugin-api</module>
-        <module>modules/wrapper</module>
-        <module>modules/kobalt</module>
-    </modules>
-
-    <repositories>
-        <repository>
-            <id>testng</id>
-            <url>https://dl.bintray.com/cbeust/maven</url>
-        </repository>
-    </repositories>
-
-    <properties>
-        <kotlin.version>1.2.71</kotlin.version>
-        <okio.version>1.13.0</okio.version>
-        <okhttp3.version>3.9.1</okhttp3.version>
-        <mavenresolver.version>1.1.0</mavenresolver.version>
-        <junit.version>1.1.0</junit.version>
-        <junitJupiter.version>5.1.0</junitJupiter.version>
-        <testng.version>6.12</testng.version>
-        <slf4j.version>1.7.3</slf4j.version>
-    </properties>
-
-</project>

settings.gradle

@@ -1,5 +0,0 @@
-rootProject.name = 'kobalt-pom'
-include(':kobalt-plugin-api', ':wrapper', ':kobalt')
-project(':kobalt-plugin-api').projectDir = file('modules/kobalt-plugin-api')
-project(':wrapper').projectDir = file('modules/wrapper')
-project(':kobalt').projectDir = file('modules/kobalt')

src/main/kotlin/com/beust/kobalt/Main.kt

@@ -17,13 +17,37 @@ import java.net.URLClassLoader
 import javax.inject.Inject
 
 fun main(argv: Array<String>) {
-    val result = Main.mainNoExit(argv)
+    val result = mainNoExit(argv)
     if (result != 0) {
         System.exit(result)
     }
 }
 
-class Main @Inject constructor(
+private fun parseArgs(argv: Array<String>): Main.RunInfo {
+    val args = Args()
+    val result = JCommander(args)
+    result.parse(*argv)
+    KobaltLogger.LOG_LEVEL = if (args.log < Constants.LOG_QUIET_LEVEL) {
+            Constants.LOG_DEFAULT_LEVEL
+        } else if (args.log > Constants.LOG_MAX_LEVEL) {
+            Constants.LOG_MAX_LEVEL
+        } else args.log
+    return Main.RunInfo(result, args)
+}
+
+fun mainNoExit(argv: Array<String>): Int {
+    val (jc, args) = parseArgs(argv)
+    Kobalt.init(MainModule(args, KobaltSettings.readSettingsXml()))
+    val result = Kobalt.INJECTOR.getInstance(Main::class.java).run {
+        val runResult = run(jc, args, argv)
+        pluginInfo.cleanUp()
+        executors.shutdown()
+        runResult
+    }
+    return result
+}
+
+private class Main @Inject constructor(
         val plugins: Plugins,
         val http: Http,
         val files: KFiles,
@@ -35,43 +59,6 @@ class Main @Inject constructor(
         val pluginInfo: PluginInfo,
         val options: Options) {
 
-    companion object {
-        fun mainNoExit(argv: Array<String>): Int {
-            val (jc, args) = parseArgs(argv)
-            if (args.usage) {
-                jc.usage()
-                return 0
-            }
-            if (args.version) {
-                println("Kobalt ${Kobalt.version}")
-                return 0
-            }
-            Kobalt.init(MainModule(args, KobaltSettings.readSettingsXml()))
-            val result = launchMain(Kobalt.INJECTOR.getInstance(Main::class.java), jc, args, argv)
-            return result
-        }
-
-        private fun parseArgs(argv: Array<String>): Main.RunInfo {
-            val args = Args()
-            val result = JCommander(args)
-            result.parse(*argv)
-            KobaltLogger.setLogLevel(args)
-            return Main.RunInfo(result, args)
-        }
-
-        /**
-         * Entry point for tests, which can instantiate their main object with their own module and injector.
-         */
-        fun launchMain(main: Main, jc: JCommander, args: Args, argv: Array<String>) : Int {
-            return main.run {
-                val runResult = run(jc, args, argv)
-                pluginInfo.cleanUp()
-                executors.shutdown()
-                runResult
-            }
-        }
-    }
-
     data class RunInfo(val jc: JCommander, val args: Args)
 
     private fun installCommandLinePlugins(args: Args): ClassLoader {

src/main/kotlin/com/beust/kobalt/Options.kt

@@ -1,10 +1,8 @@
 package com.beust.kobalt
 
 import com.beust.jcommander.JCommander
-import com.beust.kobalt.api.ITask
 import com.beust.kobalt.api.Kobalt
-import com.beust.kobalt.api.KobaltContext
-import com.beust.kobalt.api.Project
+import com.beust.kobalt.api.PluginTask
 import com.beust.kobalt.app.ProjectFinder
 import com.beust.kobalt.app.ProjectGenerator
 import com.beust.kobalt.app.Templates
@@ -46,26 +44,10 @@ class Options @Inject constructor(
         val p = if (args.buildFile != null) File(args.buildFile) else File(".")
 //        val buildFile = BuildFile(Paths.get(p.absolutePath), p.name)
         val buildSources = if (p.isDirectory) BuildSources(p.absoluteFile) else SingleFileBuildSources(p)
-        val pluginClassLoader = javaClass.classLoader
+        var pluginClassLoader = javaClass.classLoader
 
-        //
-        // Attempt to parse the build file in order to correctly set up repos, plug-ins, etc...
-        // If the build file can't be parsed, don't give up just yet since some options don't need
-        // a correct build file to work.
-        //
-        var buildError: Throwable? = null
-        val allProjects =
-                try {
-                    projectFinder.initForBuildFile(buildSources, args).projects
-                } catch(ex: Exception) {
-                    buildError = ex
-                    listOf<Project>()
-                }
-
-        fun runIfSuccessfulBuild(buildError: Throwable?, action: () -> Unit) {
-            buildError?.let { throw it }
-            action()
-        }
+        val allProjectResult = projectFinder.initForBuildFile(buildSources, args)
+        val allProjects = allProjectResult.projects
 
         // Modify `args` with options found in buildScript { kobaltOptions(...) }, if any
         addOptionsFromBuild(args, Kobalt.optionsFromBuild)
@@ -95,11 +77,9 @@ class Options @Inject constructor(
                 }),
                 Option( { -> args.projectInfo }, {
                     // --projectInfo
-                    runIfSuccessfulBuild(buildError) {
-                        allProjects.forEach {
-                            it.compileDependencies.filter { it.isMaven }.forEach {
-                                resolveDependency.run(it.id)
-                            }
+                    allProjects.forEach {
+                        it.compileDependencies.filter { it.isMaven }.forEach {
+                            resolveDependency.run(it.id)
                         }
                     }
                 }),
@@ -109,15 +89,11 @@ class Options @Inject constructor(
                 }),
                 Option( { args.tasks }, {
                     // --tasks
-                    runIfSuccessfulBuild(buildError) {
-                        displayTasks(allProjects, Kobalt.context!!)
-                    }
+                    displayTasks()
                 }),
                 Option( { args.checkVersions }, {
                     // --checkVersions
-                    runIfSuccessfulBuild(buildError) {
-                        checkVersions.run(allProjects)
-                    }
+                    checkVersions.run(allProjects)
                 }),
                 Option( { args.download }, {
                     // --download
@@ -145,19 +121,17 @@ class Options @Inject constructor(
             if (! buildSources.exists()) {
                 throw KobaltException("Could not find build file: " + buildSources)
             }
-            runIfSuccessfulBuild(buildError) {
-                val runTargetResult = taskManager.runTargets(args.targets, allProjects)
-                if (result == 0) {
-                    result = if (runTargetResult.taskResult.success) 0 else 1
-                }
+            val runTargetResult = taskManager.runTargets(args.targets, allProjects)
+            if (result == 0) {
+                result = if (runTargetResult.taskResult.success) 0 else 1
+            }
 
-                // Shutdown all plug-ins
-                plugins.shutdownPlugins()
+            // Shutdown all plug-ins
+            plugins.shutdownPlugins()
 
-                // Run the build report contributors
-                pluginInfo.buildReportContributors.forEach {
-                    it.generateReport(Kobalt.context!!)
-                }
+            // Run the build report contributors
+            pluginInfo.buildReportContributors.forEach {
+                it.generateReport(Kobalt.context!!)
             }
         }
         return result
@@ -178,29 +152,19 @@ class Options @Inject constructor(
         }
     }
 
-    private fun displayTasks(projects: List<Project>, context: KobaltContext) {
+    private fun displayTasks() {
         //
         // List of tasks, --tasks
         //
-        val tasksByPlugins = HashMultimap.create<String, ITask>()
-        projects.forEach { project ->
-            pluginInfo.taskContributors.forEach {
-                val tasks = it.tasksFor(project, context)
-                tasks.forEach {
-                    tasksByPlugins.put(it.plugin.name, it)
-                }
-            }
-        }
-        listOf(taskManager.annotationTasks, taskManager.dynamicTasks).forEach { tasks ->
-            tasks.forEach {
-                tasksByPlugins.put(it.plugin.name, it)
-            }
+        val tasksByPlugins = HashMultimap.create<String, PluginTask>()
+        taskManager.annotationTasks.forEach {
+            tasksByPlugins.put(it.plugin.name, it)
         }
         val sb = StringBuffer("List of tasks\n")
         tasksByPlugins.keySet().forEach { name ->
             sb.append("\n  " + AsciiArt.horizontalDoubleLine + " $name "
                     + AsciiArt.horizontalDoubleLine + "\n")
-            tasksByPlugins[name].distinctBy(ITask::name).sortedBy(ITask::name).forEach { task ->
+            tasksByPlugins[name].distinctBy(PluginTask::name).sortedBy(PluginTask::name).forEach { task ->
                 sb.append("    ${task.name}\t\t${task.doc}\n")
             }
         }

src/main/kotlin/com/beust/kobalt/app/BuildFiles.kt

@@ -119,7 +119,7 @@ class BuildFiles @Inject constructor(val factory: BuildFileCompiler.IFactory,
             parentFile.mkdirs()
             val imp = arrayListOf<String>().apply {
                 addAll(imports)
-            }.toMutableSet().toMutableList()
+            }.distinct()
             Collections.sort(imp)
             writeText(imp.joinToString("\n"))
             appendText(code.joinToString("\n"))

src/main/kotlin/com/beust/kobalt/app/LanguageTemplateGenerator.kt

@@ -20,8 +20,6 @@ abstract class LanguageTemplateGenerator : ITemplate {
 
     abstract val defaultSourceDirectories : HashSet<String>
     abstract val defaultTestDirectories : HashSet<String>
-    abstract val mainDependencies : ArrayList<Pom.Dependency>
-    abstract val testDependencies : ArrayList<Pom.Dependency>
     abstract val directive : String
     abstract val fileMatch : (String) -> Boolean
     abstract val fileMap: List<FileInfo>
@@ -133,19 +131,20 @@ abstract class LanguageTemplateGenerator : ITemplate {
                 put("directory", currentDir.absolutePath)
                 put("sourceDirectories", defaultSourceDirectories)
                 put("sourceDirectoriesTest", defaultTestDirectories)
-                put("mainDependencies", mainDependencies)
-                put("testDependencies", testDependencies)
                 put("imports", "import com.beust.kobalt.plugin.$templateName.*")
                 put("directive", "project")
             }
 
+            var mainDeps = arrayListOf<Pom.Dependency>()
+            var testDeps = arrayListOf<Pom.Dependency>()
+            map.put("mainDependencies", mainDeps)
+            map.put("testDependencies", testDeps)
             File("pom.xml").let {
                 if (it.absoluteFile.exists()) {
-                    importPom(it, mainDependencies, testDependencies, map)
+                    importPom(it, mainDeps, testDeps, map)
                 }
             }
 
-
             val fileInputStream = javaClass.classLoader
                     .getResource(ITemplateContributor.DIRECTORY_NAME + "/build.mustache").openStream()
             val sw = StringWriter()

src/main/kotlin/com/beust/kobalt/app/MainModule.kt

@@ -1,8 +1,6 @@
 package com.beust.kobalt.app
 
 import com.beust.kobalt.Args
-import com.beust.kobalt.JavaInfo
-import com.beust.kobalt.Jvm
 import com.beust.kobalt.app.remote.KobaltServer
 import com.beust.kobalt.internal.IncrementalManager
 import com.beust.kobalt.internal.KobaltSettings
@@ -19,7 +17,6 @@ import com.google.inject.Provider
 import com.google.inject.Singleton
 import com.google.inject.TypeLiteral
 import com.google.inject.assistedinject.FactoryModuleBuilder
-import java.io.File
 import java.util.concurrent.ExecutorService
 
 open class MainModule(val args: Args, val settings: KobaltSettings) : AbstractModule() {
@@ -52,14 +49,15 @@ open class MainModule(val args: Args, val settings: KobaltSettings) : AbstractMo
         bind(Args::class.java).toProvider(Provider<Args> {
             args
         })
-        bind(EventBus::class.java).toInstance(EventBus())
+        EventBus().let { eventBus ->
+            bind(EventBus::class.java).toInstance(eventBus)
+        }
         bind(PluginInfo::class.java).toProvider(Provider<PluginInfo> {
             PluginInfo.readKobaltPluginXml()
         }).`in`(Singleton::class.java)
         bind(KobaltSettings::class.java).toProvider(Provider<KobaltSettings> {
             settings
         }).`in`(Singleton::class.java)
-        bind(Jvm::class.java).toInstance(JavaInfo.create(File(com.beust.kobalt.SystemProperties.javaBase)))
 
 //        bindListener(Matchers.any(), object: TypeListener {
 //            override fun <I> hear(typeLiteral: TypeLiteral<I>?, typeEncounter: TypeEncounter<I>?) {

src/main/kotlin/com/beust/kobalt/app/Profiles.kt

@@ -56,7 +56,7 @@ class Profiles(val context: KobaltContext) {
                     val variable = if (match.first) match.second else oldMatch.second
 
                     if (oldMatch.first) {
-                        warn("Old profile syntax detected for \"${line.trim()}\"," +
+                        warn("Old profile syntax detected for \"$line\"," +
                                 " please update to \"val $variable by profile()\"")
                     }
 

src/main/kotlin/com/beust/kobalt/app/java/JavaTemplateGenerator.kt

@@ -1,14 +1,11 @@
 package com.beust.kobalt.app.java
 
 import com.beust.kobalt.app.LanguageTemplateGenerator
-import com.beust.kobalt.maven.Pom
 
 /**
  * Template for the "java" generator.
  */
 class JavaTemplateGenerator : LanguageTemplateGenerator() {
-    override val mainDependencies = arrayListOf<Pom.Dependency>()
-    override val testDependencies = arrayListOf<Pom.Dependency>()
     override val defaultSourceDirectories = hashSetOf("src/main/java")
     override val defaultTestDirectories = hashSetOf("src/test/java")
     override val directive = "project"

src/main/kotlin/com/beust/kobalt/app/kotlin/KotlinTemplateGenerator.kt

@@ -1,16 +1,10 @@
 package com.beust.kobalt.app.kotlin
 
-import com.beust.kobalt.Constants
 import com.beust.kobalt.app.LanguageTemplateGenerator
-import com.beust.kobalt.maven.Pom
 
 class KotlinTemplateGenerator : LanguageTemplateGenerator() {
     override val defaultSourceDirectories = hashSetOf("src/main/kotlin")
     override val defaultTestDirectories = hashSetOf("src/test/kotlin")
-    override val mainDependencies = arrayListOf(
-            Pom.Dependency("org.jetbrains.kotlin", "kotlin-stdlib", null, Constants.KOTLIN_COMPILER_VERSION)
-    )
-    override val testDependencies = arrayListOf<Pom.Dependency>()
     override val directive = "project"
     override val templateName = "kotlin"
     override val templateDescription = "Generate a simple Kotlin project"

src/main/kotlin/com/beust/kobalt/app/remote/GetDependencyGraphHandler.kt

@@ -22,6 +22,12 @@ class GetDependencyGraphHandler : WebSocketListener {
     // so I have to do dependency injections manually :-(
     val projectFinder = Kobalt.INJECTOR.getInstance(ProjectFinder::class.java)
 
+    // URL parameters sent by the client
+    val PARAMETER_PROJECT_ROOT = "projectRoot"
+    val PARAMETER_BUILD_FILE = "buildFile"  // Deprecated
+    val PARAMETER_PROFILES = "profiles"
+    val PARAMETER_DOWNLOAD_SOURCES = "downloadSources"
+
     var session: Session? = null
 
     override fun onWebSocketClose(code: Int, reason: String?) {
@@ -35,45 +41,34 @@ class GetDependencyGraphHandler : WebSocketListener {
 
     fun <T> sendWebsocketCommand(endpoint: RemoteEndpoint, commandName: String, payload: T,
             errorMessage: String? = null) {
-        SparkServer.watchDog.rearm()
         val json = Gson().toJson(WebSocketCommand(commandName, payload = Gson().toJson(payload),
                 errorMessage = errorMessage))
         endpoint.sendString(json)
     }
 
-    /**
-     * Convenience class to extract the parameters from the WebSocket connection.
-     */
-    class ParameterExtractor(val map: Map<String, List<String>>) {
-        // URL parameters sent by the client
-        private val PARAMETER_PROJECT_ROOT = "projectRoot"
-        private val PARAMETER_BUILD_FILE = "buildFile"  // Deprecated
-        private val PARAMETER_PROFILES = "profiles"
-        private val PARAMETER_DOWNLOAD_SOURCES = "downloadSources"
+    private fun findProfiles(map: Map<String, List<String>>) = map[PARAMETER_PROFILES]?.getOrNull(0)
+    private fun findDownloadSources(map: Map<String, List<String>>) = map[PARAMETER_DOWNLOAD_SOURCES]?.getOrNull(0)?.toBoolean() ?: false
 
-        val profiles = map[PARAMETER_PROFILES]?.getOrNull(0)
-        val downloadSources = map[PARAMETER_DOWNLOAD_SOURCES]?.getOrNull(0)?.toBoolean() ?: false
+    private fun findBuildFile(map: Map<String, List<String>>) : BuildSources? {
         val projectRoot = map[PARAMETER_PROJECT_ROOT]
-        val buildFile: BuildSources?
-            get() {
-                val bf = map[PARAMETER_BUILD_FILE]
-                return if (projectRoot != null) {
-                    BuildSources(File(projectRoot[0]))
-                } else if (bf != null) {
-                    BuildSources(File(bf[0]))
-                } else {
-                    null
-                }
+        val buildFile = map[PARAMETER_BUILD_FILE]
+        val result =
+            if (projectRoot != null) {
+                BuildSources(File(projectRoot[0]))
+            } else if (buildFile != null) {
+                BuildSources(File(buildFile[0]))
+            } else {
+                null
             }
+        return result
     }
 
     override fun onWebSocketConnect(s: Session) {
         session = s
         val parameterMap = s.upgradeRequest.parameterMap
-        val parameters = ParameterExtractor(parameterMap)
-        val buildSources = parameters.buildFile
-        val profiles = parameters.profiles
-        val downloadSources = parameters.downloadSources
+        val buildSources = findBuildFile(parameterMap)
+        val profiles = findProfiles(parameterMap)
+        val downloadSources = findDownloadSources(s.upgradeRequest.parameterMap)
 
         fun <T> getInstance(cls: Class<T>) : T = Kobalt.INJECTOR.getInstance(cls)
 
@@ -123,6 +118,7 @@ class GetDependencyGraphHandler : WebSocketListener {
         // Respond to the request
         sendWebsocketCommand(s.remote, RemoteDependencyData.GetDependenciesData.NAME, result,
                 errorMessage = result.errorMessage)
+        s.close()
     }
 
     override fun onWebSocketText(message: String?) {

src/main/kotlin/com/beust/kobalt/app/remote/KobaltClient.kt

@@ -12,7 +12,15 @@ import com.beust.kobalt.misc.KFiles
 import com.beust.kobalt.misc.warn
 import com.google.gson.Gson
 import com.google.inject.Guice
-import okhttp3.*
+import okhttp3.OkHttpClient
+import okhttp3.Request
+import okhttp3.Response
+import okhttp3.ResponseBody
+import okhttp3.ws.WebSocket
+import okhttp3.ws.WebSocketCall
+import okhttp3.ws.WebSocketListener
+import okio.Buffer
+import java.io.IOException
 
 fun main(argv: Array<String>) {
     Kobalt.INJECTOR = Guice.createInjector(MainModule(Args(), KobaltSettings.readSettingsXml()))
@@ -31,22 +39,26 @@ class KobaltClient : Runnable {
             .url("$url?projectRoot=$projectRoot&buildFile=$buildFile")
                 .build()
         var webSocket: WebSocket? = null
-        val socketListener = object: WebSocketListener() {
-            override fun onFailure(webSocket: WebSocket, ex: Throwable, response: Response?) {
-                Exceptions.printStackTrace(ex)
-                error("WebSocket failure: ${ex.message} response: $response")
-            }
-
+        val ws = WebSocketCall.create(client, request).enqueue(object: WebSocketListener {
             override fun onOpen(ws: WebSocket, response: Response) {
                 webSocket = ws
             }
 
-            override fun onClosing(webSocket: WebSocket, code: Int, reason: String) {
-                println("Closing socket")
+            override fun onPong(p0: Buffer?) {
+                println("WebSocket pong")
             }
 
-            override fun onMessage(webSocket: WebSocket, text: String) {
-                val json = text
+            override fun onClose(p0: Int, p1: String?) {
+                println("WebSocket closed")
+            }
+
+            override fun onFailure(ex: IOException, response: Response?) {
+                Exceptions.printStackTrace(ex)
+                error("WebSocket failure: ${ex.message} response: $response")
+            }
+
+            override fun onMessage(body: ResponseBody) {
+                val json = body.string()
                 val wsCommand = Gson().fromJson(json, WebSocketCommand::class.java)
                 if (wsCommand.errorMessage != null) {
                     warn("Received error message from server: " + wsCommand.errorMessage)
@@ -75,10 +87,7 @@ class KobaltClient : Runnable {
                     }
                 }
             }
-        }
-
-        val ws = client.newWebSocket(request, socketListener)
-        ws.close(1000, "All good")
+        })
     }
 }
 

src/main/kotlin/com/beust/kobalt/app/remote/KobaltServer.kt

@@ -1,5 +1,6 @@
 package com.beust.kobalt.app.remote
 
+import com.beust.kobalt.api.Project
 import com.beust.kobalt.homeDir
 import com.beust.kobalt.internal.PluginInfo
 import com.beust.kobalt.maven.aether.Exceptions
@@ -73,12 +74,15 @@ class KobaltServer @Inject constructor(@Assisted val force: Boolean, @Assisted @
         try {
             if (createServerFile(port, force)) {
                 kobaltLog(1, "KobaltServer listening on port $port")
+//                OldServer(initCallback, cleanUpCallback).run(port)
+//                JerseyServer(initCallback, cleanUpCallback).run(port)
                 SparkServer(cleanUpCallback, pluginInfo).run(port)
+//                WasabiServer(initCallback, cleanUpCallback).run(port)
             }
         } catch(ex: Exception) {
             Exceptions.printStackTrace(ex)
         } finally {
-            deleteServerFile()
+//            deleteServerFile()
         }
         return port
     }

src/main/kotlin/com/beust/kobalt/app/remote/RemoteDependencyData.kt

@@ -2,7 +2,6 @@ package com.beust.kobalt.app.remote
 
 import com.beust.kobalt.Args
 import com.beust.kobalt.api.IClasspathDependency
-import com.beust.kobalt.api.Kobalt
 import com.beust.kobalt.api.Project
 import com.beust.kobalt.app.BuildFileCompiler
 import com.beust.kobalt.internal.DynamicGraph
@@ -30,7 +29,7 @@ class RemoteDependencyData @Inject constructor(val executors: KobaltExecutors, v
         val taskManager: TaskManager) {
 
     fun dependenciesDataFor(buildSources: BuildSources, args: Args,
-            projectResult: BuildFileCompiler.FindProjectResult,
+            findProjectResult: BuildFileCompiler.FindProjectResult,
             progressListener: IProgressListener? = null,
             useGraph : Boolean = false): GetDependenciesData {
         val projectDatas = arrayListOf<ProjectData>()
@@ -43,7 +42,9 @@ class RemoteDependencyData @Inject constructor(val executors: KobaltExecutors, v
         fun allDeps(l: List<IClasspathDependency>, name: String) = dependencyManager.transitiveClosure(l,
                 requiredBy = name)
 
-        val buildFileDependencies = Kobalt.buildFileClasspath.map {toDependencyData(it, "compile")}
+//        val buildFile = BuildFile(Paths.get(buildFilePath), "GetDependenciesCommand")
+        val buildFileCompiler = buildFileCompilerFactory.create(buildSources, pluginInfo)
+        val projectResult = buildFileCompiler.compileBuildFiles(args)
 
         val pluginDependencies = projectResult.pluginUrls.map { File(it.toURI()) }.map {
             DependencyData(it.name, "compile", it.absolutePath)
@@ -175,8 +176,8 @@ class RemoteDependencyData @Inject constructor(val executors: KobaltExecutors, v
                     })
         }
 
-        return GetDependenciesData(projectDatas, allTasks, pluginDependencies, buildFileDependencies,
-                projectResult.buildContentRoots, projectResult.taskResult.errorMessage)
+        return GetDependenciesData(projectDatas, allTasks, pluginDependencies, findProjectResult.buildContentRoots,
+                projectResult.taskResult.errorMessage)
     }
 
     /////
@@ -201,7 +202,6 @@ class RemoteDependencyData @Inject constructor(val executors: KobaltExecutors, v
     class GetDependenciesData(val projects: List<ProjectData> = emptyList(),
             val allTasks: Collection<TaskData> = emptySet(),
             val pluginDependencies: List<DependencyData> = emptyList(),
-            val buildFileDependencies: List<DependencyData> = emptyList(),
             val buildContentRoots: List<String> = emptyList(),
             val errorMessage: String?) {
         companion object {

src/main/kotlin/com/beust/kobalt/app/remote/SparkServer.kt

@@ -5,7 +5,6 @@ import com.beust.kobalt.app.Templates
 import com.beust.kobalt.internal.PluginInfo
 import com.google.common.collect.ListMultimap
 import com.google.gson.Gson
-import org.slf4j.Logger
 import spark.ResponseTransformer
 import spark.Route
 import spark.Spark
@@ -15,8 +14,6 @@ class SparkServer(val cleanUpCallback: () -> Unit, val pluginInfo : PluginInfo)
 
     companion object {
         lateinit var cleanUpCallback: () -> Unit
-        val URL_QUIT = "/quit"
-        lateinit var watchDog: WatchDog
     }
 
     init {
@@ -31,25 +28,19 @@ class SparkServer(val cleanUpCallback: () -> Unit, val pluginInfo : PluginInfo)
     private fun jsonRoute(path: String, route: Route)
         = Spark.get(path, "application/json", route, JsonTransformer())
 
-    val log: Logger = org.slf4j.LoggerFactory.getLogger("SparkServer")
+    val log = org.slf4j.LoggerFactory.getLogger("SparkServer")
 
     override fun run(port: Int) {
-        val threadPool = Executors.newFixedThreadPool(2)
-        watchDog = WatchDog(port, 60 * 10 /* 10 minutes */, log)
-        threadPool.submit {
-            watchDog.run()
-        }
         log.debug("Server running")
         Spark.port(port)
         Spark.webSocket("/v1/getDependencyGraph", GetDependencyGraphHandler::class.java)
         Spark.get("/ping") { req, res ->
-            watchDog.rearm()
             log.debug("  Received ping")
             """ { "result" : "ok" } """
         }
-        Spark.get(URL_QUIT, { req, res ->
+        Spark.get("/quit", { req, res ->
             log.debug("  Received quit")
-            threadPool.let { executor ->
+            Executors.newFixedThreadPool(1).let { executor ->
                 executor.submit {
                     Thread.sleep(1000)
                     Spark.stop()

src/main/kotlin/com/beust/kobalt/app/remote/WatchDog.kt

@@ -1,71 +0,0 @@
-package com.beust.kobalt.app.remote
-
-import com.beust.kobalt.misc.warn
-import org.slf4j.Logger
-import java.net.HttpURLConnection
-import java.net.URL
-import java.time.Duration
-import java.time.LocalDateTime
-import java.time.OffsetDateTime
-import java.time.format.DateTimeFormatter
-
-/**
- * Wakes up every `WAKE_UP_INTERVAL` and check if a certain period of time (`checkPeriod`) has elapsed
- * without being rearmed. If that time has elapsed, send a QUIT command to the Kobalt server. If the WatchDog
- * gets rearmed, the expiration period is reset.
- */
-class WatchDog(val port: Int, val checkPeriodSeconds: Long, val log: Logger) {
-    private val WAKE_UP_INTERVAL: Duration = Duration.ofSeconds(60)
-    private val FORMAT: DateTimeFormatter = DateTimeFormatter.ofPattern("MM/d/y HH:mm:ss")
-
-    private var nextWakeUpMillis: Long = arm()
-    private var stop: Boolean = false
-
-    /**
-     * Rearm for another `checkPeriod`.
-     */
-    fun rearm() {
-        nextWakeUpMillis = arm()
-        log.info("Watchdog rearmed for " + format(nextWakeUpMillis))
-    }
-
-    /**
-     * Start the watch dog.
-     */
-    fun run() {
-        val wakeUpSeconds = WAKE_UP_INTERVAL.toMillis()
-        log.info("Server dying at " + format(nextWakeUpMillis) + ", next wake up in "
-                + (wakeUpSeconds / 1000) + " seconds")
-        while (! stop) {
-            Thread.sleep(wakeUpSeconds)
-            val diffSeconds = (nextWakeUpMillis - System.currentTimeMillis()) / 1000
-            if (diffSeconds <= 0) {
-                log.info("Time to die")
-                stop = true
-            } else {
-                log.info("Dying in $diffSeconds seconds")
-            }
-        }
-
-        try {
-            val connection = (URL("http://localhost:$port" + SparkServer.URL_QUIT)
-                    .openConnection() as HttpURLConnection).apply {
-                requestMethod = "GET"
-            }
-            val code = connection.responseCode
-            if (code == 200) {
-                log.info("Successfully stopped the server")
-            } else {
-                warn("Couldn't stop the server, response: " + code)
-            }
-        } catch(ex: Exception) {
-            warn("Couldn't stop the server: " + ex.message, ex)
-        }
-    }
-
-    private fun arm() = System.currentTimeMillis() + (checkPeriodSeconds * 1000)
-
-    private fun toLocalDate(millis: Long) = LocalDateTime.ofEpochSecond(millis / 1000, 0, OffsetDateTime.now().offset)
-
-    private fun format(millis: Long) = FORMAT.format(toLocalDate(millis))
-}

src/main/kotlin/com/beust/kobalt/plugin/KobaltPlugin.kt

@@ -27,4 +27,11 @@ class KobaltPlugin @Inject constructor(val checkVersions: CheckVersions, val upd
         checkVersions.run(project)
         return TaskResult()
     }
+
+    @Task(name = "update", description = "Update Kobalt to the latest version")
+    fun taskUpdate(project: Project) : TaskResult {
+        updateKobalt.updateKobalt()
+        return TaskResult()
+    }
+
 }

src/main/kotlin/com/beust/kobalt/plugin/application/ApplicationPlugin.kt

@@ -1,18 +1,17 @@
 package com.beust.kobalt.plugin.application
 
-import com.beust.kobalt.Jvm
-import com.beust.kobalt.KobaltException
-import com.beust.kobalt.Plugins
-import com.beust.kobalt.TaskResult
+import com.beust.kobalt.*
 import com.beust.kobalt.api.*
 import com.beust.kobalt.api.annotation.Directive
+import com.beust.kobalt.api.annotation.Task
 import com.beust.kobalt.archive.Archives
+import com.beust.kobalt.internal.ActorUtils
 import com.beust.kobalt.maven.DependencyManager
 import com.beust.kobalt.maven.aether.Scope
 import com.beust.kobalt.misc.KFiles
 import com.beust.kobalt.misc.KobaltExecutors
+import com.beust.kobalt.misc.RunCommand
 import com.beust.kobalt.misc.kobaltLog
-import com.beust.kobalt.misc.runCommand
 import com.beust.kobalt.plugin.packaging.PackageConfig
 import com.beust.kobalt.plugin.packaging.PackagingPlugin
 import com.google.inject.Inject
@@ -20,9 +19,6 @@ import com.google.inject.Singleton
 import java.io.File
 
 class ApplicationConfig {
-    @Directive
-    var taskName: String = "run"
-
     @Directive
     var mainClass: String? = null
 
@@ -33,15 +29,6 @@ class ApplicationConfig {
     @Directive
     fun args(vararg argv: String) = argv.forEach { args.add(it) }
     val args = arrayListOf<String>()
-
-    @Directive
-    var ignoreErrorStream: Boolean = false
-
-    @Directive
-    var ignoreInputStream: Boolean = true
-
-    @Directive
-    var ignoreExitValue: Boolean = false
 }
 
 @Directive
@@ -53,10 +40,10 @@ fun Project.application(init: ApplicationConfig.() -> Unit): ApplicationConfig {
 }
 
 @Singleton
-class ApplicationPlugin @Inject constructor(val configActor: ConfigsActor<ApplicationConfig>,
+class ApplicationPlugin @Inject constructor(val configActor: ConfigActor<ApplicationConfig>,
         val executors: KobaltExecutors, val nativeManager: NativeManager,
-        val dependencyManager: DependencyManager, val taskContributor : TaskContributor, val jvm: Jvm)
-            : BasePlugin(), ITaskContributor, IConfigsActor<ApplicationConfig> by configActor {
+        val dependencyManager: DependencyManager, val taskContributor : TaskContributor)
+            : BasePlugin(), IRunnerContributor, ITaskContributor, IConfigActor<ApplicationConfig> by configActor {
 
     companion object {
         const val PLUGIN_NAME = "Application"
@@ -66,50 +53,49 @@ class ApplicationPlugin @Inject constructor(val configActor: ConfigsActor<Applic
 
     override fun apply(project: Project, context: KobaltContext) {
         super.apply(project, context)
-
-        configurationFor(project)?.let { configs ->
-            configs.forEach { config ->
-                taskContributor.addTask(this, project, config.taskName,
-                        description = "Run the class " + config.mainClass,
-                        group = "run",
-                        dependsOn = listOf("assemble"),
-                        runTask = { run(project, context, config) })
-            }
-        }
+        taskContributor.addVariantTasks(this, project, context, "run", group = "run", dependsOn = listOf("install"),
+                runTask = { taskRun(project) })
     }
 
-//    fun taskRun(project: Project, config: ApplicationConfig): TaskResult {
-//        val runContributor = ActorUtils.selectAffinityActor(project, context,
-//                context.pluginInfo.runnerContributors)
-//        if (runContributor != null && runContributor.affinity(project, context) > 0) {
-//            return runContributor.run(project, context,
-//                    dependencyManager.dependencies(project, context, listOf(Scope.RUNTIME)))
-//        } else {
-//            context.logger.log(project.name, 1,
-//                    "Couldn't find a runner for project ${project.name}. Please make sure" +
-//                    " your build file contains " +
-//                    "an application{} directive with a mainClass=... in it")
-//            return TaskResult()
-//        }
-//    }
+    @Task(name = "run", description = "Run the main class", group = "run", dependsOn = arrayOf("install"))
+    fun taskRun(project: Project): TaskResult {
+        val runContributor = ActorUtils.selectAffinityActor(project, context,
+                context.pluginInfo.runnerContributors)
+        if (runContributor != null && runContributor.affinity(project, context) > 0) {
+            return runContributor.run(project, context,
+                    dependencyManager.dependencies(project, context, listOf(Scope.RUNTIME)))
+        } else {
+            context.logger.log(project.name, 1,
+                    "Couldn't find a runner for project ${project.name}. Please make sure" +
+                    " your build file contains " +
+                    "an application{} directive with a mainClass=... in it")
+            return TaskResult()
+        }
+    }
 
     private fun isFatJar(packages: List<PackageConfig>, jarName: String): Boolean {
         val foundJar = packages.flatMap { it.jars }.filter { jarName.endsWith(it.name) }
         return foundJar.size == 1 && foundJar[0].fatJar
     }
 
-    private fun run(project: Project, context: KobaltContext, config: ApplicationConfig): TaskResult {
+    // IRunContributor
+
+    override fun affinity(project: Project, context: KobaltContext): Int {
+        return if (configurationFor(project) != null) IAffinity.DEFAULT_POSITIVE_AFFINITY else 0
+    }
+
+    override fun run(project: Project, context: KobaltContext, classpath: List<IClasspathDependency>): TaskResult {
+        var result = TaskResult()
         if (project.nativeDependencies.any()) {
             nativeManager.installLibraries(project)
         }
-
-        val result =
+        configurationFor(project)?.let { config ->
             if (config.mainClass != null) {
-                runJarFile(project, context, config)
+                result = runJarFile(project, context, config)
             } else {
                 throw KobaltException("No \"mainClass\" specified in the application{} part of project ${project.name}")
             }
-
+        }
         return result
     }
 
@@ -120,12 +106,14 @@ class ApplicationPlugin @Inject constructor(val configActor: ConfigsActor<Applic
             ?: project.projectProperties.get(Archives.JAR_NAME)?.toString()
             ?: throw KobaltException("Couldn't find any jar file with a main class in it")
 
-        // The application will run in the project's directory, so we don't need to add project.directory here
-        val jarName = KFiles.joinDir(project.buildDirectory, KFiles.LIBS_DIR, fileName)
+        val jarFileName = KFiles.joinDir(KFiles.libsDir(project), fileName)
+        val jarName = (jarFileName ?: KFiles.joinDir(KFiles.libsDir(project),
+                context.variant.archiveName(project, null, ".jar")))
+            as String
         @Suppress("UNCHECKED_CAST")
         val packages = project.projectProperties.get(PackagingPlugin.PACKAGES) as List<PackageConfig>
         val allDeps = arrayListOf(jarName)
-        val java = jvm.javaExecutable!!
+        val java = JavaInfo.create(File(SystemProperties.javaBase)).javaExecutable!!
         if (! isFatJar(packages, jarName)) {
             @Suppress("UNCHECKED_CAST")
             // If the jar file is not fat, we need to add the transitive closure of all dependencies
@@ -143,38 +131,20 @@ class ApplicationPlugin @Inject constructor(val configActor: ConfigsActor<Applic
         val contributorFlags = context.pluginInfo.jvmFlagContributors.flatMap {
             it.jvmFlagsFor(project, context, initialArgs)
         }
-        val allArgs = contributorFlags + initialArgs + config.args
-        val exitCode = runCommand {
-            command = "java"
-            args = allArgs
-            useErrorStreamAsErrorIndicator = false
-            directory = File(project.directory)
-            successCallback = { output: List<String> ->
-                kobaltLog(1, output.joinToString("\n"))
-            }
-            errorCallback =  { output: List<String> ->
-                kobaltLog(1, "ERROR")
-                kobaltLog(1, output.joinToString("\n"))
-            }
-            useErrorStreamAsErrorIndicator = !config.ignoreErrorStream
-            useInputStreamAsErrorIndicator = !config.ignoreInputStream
-            ignoreExitValue = config.ignoreExitValue
-        }
+        val args = contributorFlags + initialArgs + config.args
+        val exitCode = RunCommand(java.absolutePath).run(args,
+                successCallback = { output: List<String> ->
+                    kobaltLog(1, output.joinToString("\n"))
+                },
+                errorCallback =  { output: List<String> ->
+                    kobaltLog(1, "ERROR")
+                    kobaltLog(1, output.joinToString("\n"))
+                }
+        )
         return TaskResult(exitCode == 0)
     }
 
     //ITaskContributor
-    override fun tasksFor(project: Project, context: KobaltContext): List<DynamicTask> {
-        val result = arrayListOf<DynamicTask>()
-        configurationFor(project)?.let { configs ->
-            configs.forEach { config ->
-                result.add(DynamicTask(this, config.taskName, "Run the class " + config.mainClass, "run", project,
-                        dependsOn = listOf("assemble"),
-                        closure = { run(project, context, config) }))
-            }
-        }
-
-        return result
-    }
+    override fun tasksFor(project: Project, context: KobaltContext): List<DynamicTask> = taskContributor.dynamicTasks
 }